{"title":"Enhanced identification of glycoproteins and allergens in <i>Hevea brasiliensis</i> latex using innovative enrichment techniques.","authors":"Nur Syafiqah Mohd Afandi, Mohd Nazri Ismail","doi":"10.1080/10826068.2025.2460520","DOIUrl":null,"url":null,"abstract":"<p><p><i>Hevea brasiliensis</i> is the most efficient crop for latex production and has been the main source for global commercialisation since 1876. However, little is known about its glycosylation properties. Studying glycoproteomics has been challenging due to analytical difficulties and the heterogeneous nature of glycans. In this study, we extracted natural rubber latex (NRL) proteins, purify peptide/glycopeptide mixtures and isolate glycopeptides using HILIC, SAX, and TiO<sub>2</sub> enrichment methods. TiO<sub>2</sub> showed high selectivity compared to SAX and HILIC, retaining unique proteins and glycans based on hydrophilicity. We identified proteins using LC-MS/MS and PEAKS Studio 7.5. These methods significantly improved protein coverage compared to non-enriched samples. Three glycoproteins (patatin, REF, and glucan endo-1,3-beta-D-glucosidase) and seven internationally recognised allergens (hev b 1, hev b 2, hev b 3, hev b 5, hev b 7, hev b 14, and hev b 15) were identified. These enrichment methods not only helped identify glycoproteins but also improved protein sequence coverage.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-9"},"PeriodicalIF":2.0000,"publicationDate":"2025-02-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Preparative Biochemistry & Biotechnology","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1080/10826068.2025.2460520","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
摘要
巴西橡胶是生产乳胶最有效的作物,自 1876 年以来一直是全球商业化的主要来源。然而,人们对其糖基化特性知之甚少。由于分析困难和聚糖的异质性,研究糖蛋白组学一直具有挑战性。在本研究中,我们采用 HILIC、SAX 和 TiO2 富集法提取天然橡胶胶乳(NRL)蛋白质、纯化肽/糖肽混合物并分离糖肽。与 SAX 和 HILIC 相比,TiO2 显示出较高的选择性,可根据亲水性保留独特的蛋白质和糖。我们使用 LC-MS/MS 和 PEAKS Studio 7.5 对蛋白质进行了鉴定。与未富集的样本相比,这些方法大大提高了蛋白质的覆盖率。我们鉴定出了三种糖蛋白(patatin、REF 和葡聚糖内-1,3-beta-D-葡萄糖苷酶)和七种国际公认的过敏原(hev b 1、hev b 2、hev b 3、hev b 5、hev b 7、hev b 14 和 hev b 15)。这些富集方法不仅有助于鉴定糖蛋白,还提高了蛋白质序列覆盖率。
Enhanced identification of glycoproteins and allergens in Hevea brasiliensis latex using innovative enrichment techniques.
Hevea brasiliensis is the most efficient crop for latex production and has been the main source for global commercialisation since 1876. However, little is known about its glycosylation properties. Studying glycoproteomics has been challenging due to analytical difficulties and the heterogeneous nature of glycans. In this study, we extracted natural rubber latex (NRL) proteins, purify peptide/glycopeptide mixtures and isolate glycopeptides using HILIC, SAX, and TiO2 enrichment methods. TiO2 showed high selectivity compared to SAX and HILIC, retaining unique proteins and glycans based on hydrophilicity. We identified proteins using LC-MS/MS and PEAKS Studio 7.5. These methods significantly improved protein coverage compared to non-enriched samples. Three glycoproteins (patatin, REF, and glucan endo-1,3-beta-D-glucosidase) and seven internationally recognised allergens (hev b 1, hev b 2, hev b 3, hev b 5, hev b 7, hev b 14, and hev b 15) were identified. These enrichment methods not only helped identify glycoproteins but also improved protein sequence coverage.
期刊介绍:
Preparative Biochemistry & Biotechnology is an international forum for rapid dissemination of high quality research results dealing with all aspects of preparative techniques in biochemistry, biotechnology and other life science disciplines.