芸苔属植物中未被充分研究的物种的系统发育模式:后基因组时代的未来展望

IF 2.2 Q3 GENETICS & HEREDITY
Parthiban Subramanian , Hemavathi Brijesh , Bum-Soo Hahn
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引用次数: 0

摘要

由于其在全球范围内种植的作物的多样性,芸苔属仍然是世界范围内重要的农业植物属之一。尽管芸苔属植物具有丰富的物种多样性,但对其系统发育和进化起源的详细研究主要集中在6个物种上,而这6个物种几乎产生了目前栽培的所有芸苔属作物。对这六种作物的特定性状进行持续育种已经带来了重大挑战,包括营养枯竭、对植物病原体的易感性增加以及对当前一代作物气候条件变化的脆弱性。油菜种间系统发育关系的缺乏是阻碍油菜资源无偏保护和利用的重要障碍。我们通过加强来自几个遗传标记和基于代谢物的研究数据,确定了油菜作物野生近缘(CWRs)之间假定的系统发育关系。强调了基因组数据的补充和公共数据库中芸苔属作物野生近缘(CWRs)基因组数据的现状。本报告确定了芸苔属植物研究的关键空白,解决这些空白将促进芸苔属植物遗传资源的有效保护和利用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Phylogenetic patterns of understudied species within the plant genus Brassica: Future prospects in the post genomics-era
Brassica remains to be one of the agriculturally important genera of plants worldwide due to its diverse nature of crops cultivated all across the globe. Despite the rich species diversity within the genus Brassica, detailed studies on phylogeny and evolutionary origins have primarily focused on just six species, which have given rise to nearly all of the currently cultivated Brassica crops. Continuous breeding practices for specific traits in these six species have led to significant challenges, including nutrient depletion, increased susceptibility to plant pathogens, and vulnerability to changing climate conditions in the present generation of crops. Lack of established phylogenetic relationships among the species of Brassica remains to be a significant barrier hindering error-free conservation and use of Brassica resources. We have identified putative phylogenetic relationships between Brassica crop wild relatives (CWRs) by reinforcing data from several genetic markers and metabolite based studies. Supplementation of genomic data for a robust phylogeny and current status of availability of genomic data of Brassica crop wild relatives (CWRs) from public database has been highlighted. This report identifies critical gaps in Brassica research addressing of which would facilitate effective conservation and use of Brassica genetic resources.
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来源期刊
Plant Gene
Plant Gene Agricultural and Biological Sciences-Plant Science
CiteScore
4.50
自引率
0.00%
发文量
42
审稿时长
51 days
期刊介绍: Plant Gene publishes papers that focus on the regulation, expression, function and evolution of genes in plants, algae and other photosynthesizing organisms (e.g., cyanobacteria), and plant-associated microorganisms. Plant Gene strives to be a diverse plant journal and topics in multiple fields will be considered for publication. Although not limited to the following, some general topics include: Gene discovery and characterization, Gene regulation in response to environmental stress (e.g., salinity, drought, etc.), Genetic effects of transposable elements, Genetic control of secondary metabolic pathways and metabolic enzymes. Herbal Medicine - regulation and medicinal properties of plant products, Plant hormonal signaling, Plant evolutionary genetics, molecular evolution, population genetics, and phylogenetics, Profiling of plant gene expression and genetic variation, Plant-microbe interactions (e.g., influence of endophytes on gene expression; horizontal gene transfer studies; etc.), Agricultural genetics - biotechnology and crop improvement.
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