新菌株Alcaligenes sp. TD-94降解氨氮特性及POD基因调控机制

IF 4.1 2区 环境科学与生态学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Meimei Wan, Peiyang Zheng, Yang Liu, Ying Lei, Yuanyuan Dong, Zhiqiang Cai
{"title":"新菌株Alcaligenes sp. TD-94降解氨氮特性及POD基因调控机制","authors":"Meimei Wan,&nbsp;Peiyang Zheng,&nbsp;Yang Liu,&nbsp;Ying Lei,&nbsp;Yuanyuan Dong,&nbsp;Zhiqiang Cai","doi":"10.1016/j.ibiod.2025.106002","DOIUrl":null,"url":null,"abstract":"<div><div>Heterotrophic nitrification-aerobic denitrification bacteria have attracted more and more attention due to their high tolerance to ammonia nitrogen, efficient nitrogen removal capacity, and strong pH adaptability. This experiment studied the optimal conditions for the degradation of ammonia nitrogen by the heterotrophic nitrification-aerobic denitrification strain <em>Alcaligenes</em> sp. TD-94. Based on gene identification results, the metabolic pathway of TD-94 for degrading ammonia nitrogen was inferred. The key enzyme pyruvic oxime dioxygenase (<em>POD</em>) in the heterotrophic nitrification process was purified, and its catalytic properties were studied. The results showed that the denitrification performance of <em>Alcaligenes</em> sp. TD-94 was optimal when the carbon source was sodium acetate, the C/N ratio was 10, the pH was 7.0, the inoculation amount was 10%, and the temperature was 28–37 °C. The pathway of strain TD-94 is NH<sub>4</sub><sup>+</sup> - NH<sub>2</sub>OH - NO<sub>2</sub><sup>−</sup> - NO - N<sub>2</sub>O - N<sub>2</sub>. In the experiment, <em>POD</em> was successfully expressed at 28 °C. After purification, it remained stably expressed, and enzymatic reaction verification showed good nitrite generation. The protein structure of <em>POD</em> was predicted, and it was highly similar to the known aldolase structure in the PBD database, and the predicted amino acid sequence of POD from positions 32 to 210 was detected as the aldolase domain.</div></div>","PeriodicalId":13643,"journal":{"name":"International Biodeterioration & Biodegradation","volume":"198 ","pages":"Article 106002"},"PeriodicalIF":4.1000,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Ammonia nitrogen degrading characteristics by the novel strain Alcaligenes sp. TD-94 and regulation mechanism of POD gene\",\"authors\":\"Meimei Wan,&nbsp;Peiyang Zheng,&nbsp;Yang Liu,&nbsp;Ying Lei,&nbsp;Yuanyuan Dong,&nbsp;Zhiqiang Cai\",\"doi\":\"10.1016/j.ibiod.2025.106002\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Heterotrophic nitrification-aerobic denitrification bacteria have attracted more and more attention due to their high tolerance to ammonia nitrogen, efficient nitrogen removal capacity, and strong pH adaptability. This experiment studied the optimal conditions for the degradation of ammonia nitrogen by the heterotrophic nitrification-aerobic denitrification strain <em>Alcaligenes</em> sp. TD-94. Based on gene identification results, the metabolic pathway of TD-94 for degrading ammonia nitrogen was inferred. The key enzyme pyruvic oxime dioxygenase (<em>POD</em>) in the heterotrophic nitrification process was purified, and its catalytic properties were studied. The results showed that the denitrification performance of <em>Alcaligenes</em> sp. TD-94 was optimal when the carbon source was sodium acetate, the C/N ratio was 10, the pH was 7.0, the inoculation amount was 10%, and the temperature was 28–37 °C. The pathway of strain TD-94 is NH<sub>4</sub><sup>+</sup> - NH<sub>2</sub>OH - NO<sub>2</sub><sup>−</sup> - NO - N<sub>2</sub>O - N<sub>2</sub>. In the experiment, <em>POD</em> was successfully expressed at 28 °C. After purification, it remained stably expressed, and enzymatic reaction verification showed good nitrite generation. The protein structure of <em>POD</em> was predicted, and it was highly similar to the known aldolase structure in the PBD database, and the predicted amino acid sequence of POD from positions 32 to 210 was detected as the aldolase domain.</div></div>\",\"PeriodicalId\":13643,\"journal\":{\"name\":\"International Biodeterioration & Biodegradation\",\"volume\":\"198 \",\"pages\":\"Article 106002\"},\"PeriodicalIF\":4.1000,\"publicationDate\":\"2025-02-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Biodeterioration & Biodegradation\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S096483052500006X\",\"RegionNum\":2,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Biodeterioration & Biodegradation","FirstCategoryId":"93","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S096483052500006X","RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

异养硝化-好氧反硝化细菌因其对氨氮的高耐受性、高效脱氮能力和较强的pH适应性而受到越来越多的关注。本试验研究了异养硝化-好氧反硝化菌株Alcaligenes sp. TD-94降解氨氮的最佳条件。根据基因鉴定结果,推测了TD-94降解氨氮的代谢途径。对异养硝化过程中的关键酶丙酮肟双加氧酶(POD)进行了纯化,并对其催化性能进行了研究。结果表明,当碳源为乙酸钠、碳氮比为10、pH为7.0、接种量为10%、温度为28 ~ 37℃时,Alcaligenes sp. TD-94的反硝化效果最佳。菌株TD-94的途径为NH4+ - NH2OH - NO2 - NO - N2O - N2。实验中,POD在28°C下成功表达。纯化后保持稳定表达,酶促反应验证亚硝酸盐生成良好。预测的POD蛋白结构与PBD数据库中已知的醛缩酶结构高度相似,预测的POD 32 ~ 210位氨基酸序列为醛缩酶结构域。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Ammonia nitrogen degrading characteristics by the novel strain Alcaligenes sp. TD-94 and regulation mechanism of POD gene

Ammonia nitrogen degrading characteristics by the novel strain Alcaligenes sp. TD-94 and regulation mechanism of POD gene
Heterotrophic nitrification-aerobic denitrification bacteria have attracted more and more attention due to their high tolerance to ammonia nitrogen, efficient nitrogen removal capacity, and strong pH adaptability. This experiment studied the optimal conditions for the degradation of ammonia nitrogen by the heterotrophic nitrification-aerobic denitrification strain Alcaligenes sp. TD-94. Based on gene identification results, the metabolic pathway of TD-94 for degrading ammonia nitrogen was inferred. The key enzyme pyruvic oxime dioxygenase (POD) in the heterotrophic nitrification process was purified, and its catalytic properties were studied. The results showed that the denitrification performance of Alcaligenes sp. TD-94 was optimal when the carbon source was sodium acetate, the C/N ratio was 10, the pH was 7.0, the inoculation amount was 10%, and the temperature was 28–37 °C. The pathway of strain TD-94 is NH4+ - NH2OH - NO2 - NO - N2O - N2. In the experiment, POD was successfully expressed at 28 °C. After purification, it remained stably expressed, and enzymatic reaction verification showed good nitrite generation. The protein structure of POD was predicted, and it was highly similar to the known aldolase structure in the PBD database, and the predicted amino acid sequence of POD from positions 32 to 210 was detected as the aldolase domain.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
9.60
自引率
10.40%
发文量
107
审稿时长
21 days
期刊介绍: International Biodeterioration and Biodegradation publishes original research papers and reviews on the biological causes of deterioration or degradation.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信