野生鸟类在丹麦传播高致病性禽流感中的作用:使用时空模型的探索

IF 2.6 3区 环境科学与生态学 Q2 ECOLOGY
Yangfan Liu , Lene Jung Kjær , Anette Ella Boklund , Preben Clausen , Timme Nyegaard , Michael P. Ward , Shawn Laffan , Carsten Thure Kirkeby
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引用次数: 0

摘要

为了探索高致病性禽流感(HPAI)在丹麦野生鸟类种群中的传播动态,我们开发了一个随机时空模拟模型DanHPAIwild,并生成了一个随时间变化的风险图。丹麦及其近岸水域被栅格化成10 × 10公里的单元格。在流行病学年(10月至9月)期间,通过调整缺失报告,然后将估计值与原始种群数量进行比较,估计了五种水鸟物种的丰度每周变化。该模型由鸟类丰度和环境传播两部分组成。利用自愿报告的每周鸟类数量、已发表的文献和鸟类生态学专家意见,建立了鸟类丰度动态模型。环境传播通过饮用受污染的水模拟了高致禽流感病毒(HPAIV)暴露,同时病毒在栅格化细胞中脱落。我们使用2020/21季节的被动监测数据对模型进行了校准和初始化,并对输入进行了优化,以尽量减少模拟结果与观测结果之间的偏差。敏感性分析表明,中位感染剂量和接触高峰时间的变化对模拟鸟类的死亡率有显著影响。该模型还检验了去除传染性死鸟作为一种潜在的控制策略,结果表明,与不采取干预措施相比,去除50%的死鸟可将HPAIV的年死亡率降低38%。该模型较好地反映了现实生活中的时空格局,突出了靠近海岸线和水域的高风险区域。这些发现为了解丹麦野生鸟类的HPAIV动态提供了有价值的见解,并有助于为干预和监测分配资源。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The role of wild birds in transmitting highly pathogenic avian influenza in Denmark: An exploration using a spatiotemporal model
We developed a stochastic spatiotemporal simulation model, DanHPAIwild, to explore the transmission dynamics of highly pathogenic avian influenza (HPAI) in wild bird populations and generate a time-dependent risk map in Denmark. Denmark and its near-coast waters were rasterised into 10 × 10 km cells. Weekly changes in abundance of five waterbird species over an epidemiological year (October to September) were estimated by adjusting missing reports and then comparing the estimates with raw population numbers. The model consisted of two parts: bird abundance and environmental transmission. Dynamics of bird abundance were modelled using voluntarily reported weekly bird counts, published literature, and expert opinion on bird ecology. Environmental transmission simulated HPAI virus (HPAIV) exposure via consumption of contaminated water, together with viral shedding in the rasterised cells. We calibrated and initialised the model with passive surveillance data from the 2020/21 season, refining inputs to minimise deviations between simulated and observed outcomes. Sensitivity analyses revealed that variations in the median infection dose and peak time of contacts notably influencing the simulated bird mortality. The model also examined removing infectious dead birds as a potential control strategy, showing that removing 50 % reduced the annual HPAIV mortality by 38 % compared to implementing no interventions. The model reflects well the real-life spatiotemporal patterns, highlighting high-risk areas close to coastline and water areas. These findings offer valuable insights into HPAIV dynamics in wild birds in Denmark and can aid resource allocation for interventions and surveillance.
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来源期刊
Ecological Modelling
Ecological Modelling 环境科学-生态学
CiteScore
5.60
自引率
6.50%
发文量
259
审稿时长
69 days
期刊介绍: The journal is concerned with the use of mathematical models and systems analysis for the description of ecological processes and for the sustainable management of resources. Human activity and well-being are dependent on and integrated with the functioning of ecosystems and the services they provide. We aim to understand these basic ecosystem functions using mathematical and conceptual modelling, systems analysis, thermodynamics, computer simulations, and ecological theory. This leads to a preference for process-based models embedded in theory with explicit causative agents as opposed to strictly statistical or correlative descriptions. These modelling methods can be applied to a wide spectrum of issues ranging from basic ecology to human ecology to socio-ecological systems. The journal welcomes research articles, short communications, review articles, letters to the editor, book reviews, and other communications. The journal also supports the activities of the [International Society of Ecological Modelling (ISEM)](http://www.isemna.org/).
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