{"title":"施用灌柳片有机改良剂对土壤微生物群落动态的影响。","authors":"Yvonne Uwituze, Judith Nyiraneza, Kyra Dougherty, Cameron Wagg, Yefang Jiang, Jacynthe Dessureaut-Rompré, Fatima Mitterboeck, Tandra D Fraser","doi":"10.1139/cjm-2024-0110","DOIUrl":null,"url":null,"abstract":"<p><p>Incorporating shrub willow chips into soil may improve the chemical, physical, and biological properties of soils with low organic matter but the impact on soil microbial communities and their dynamics is not known. We assessed changes in the soil microbial communities in response to willow chip applied at increasing rates (0, 20, 40, and 60 Mg ha<sup>-1</sup>) in a potato-barley cropping system. Bacterial and fungal community diversity, relative abundance, and potential functions were assessed using amplicon sequencing of 16S and ITS rRNA genes at six time points. High rates (40 and 60 Mg ha<sup>-1</sup>) of willow chips had no effect on bacterial alpha diversity but significantly decreased fungal alpha diversity (Shannon) while increasing fungal richness (Chao-1). At rates of 40 Mg ha<sup>-1</sup> and higher, the relative abundance of copiotrophic bacterial groups increased, while that of copiotrophic fungal groups decreased. The relative abundance of the most dominant microbial phyla and genera varied over time, with copiotrophic groups declining and oligotrophic groups increasing. High willow chip application rates increased bacterial molecular markers related to carbon fixation and degradation, nitrogen fixation, and phosphorus solubilization, while decreasing markers related to cellobiose transport and denitrification. This study demonstrates the ability of willow chips to influence the microbial community composition and potential function over time.</p>","PeriodicalId":9381,"journal":{"name":"Canadian journal of microbiology","volume":" ","pages":"1-20"},"PeriodicalIF":1.8000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"The application of shrub willow chip organic amendments impacts soil microbial community dynamics.\",\"authors\":\"Yvonne Uwituze, Judith Nyiraneza, Kyra Dougherty, Cameron Wagg, Yefang Jiang, Jacynthe Dessureaut-Rompré, Fatima Mitterboeck, Tandra D Fraser\",\"doi\":\"10.1139/cjm-2024-0110\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Incorporating shrub willow chips into soil may improve the chemical, physical, and biological properties of soils with low organic matter but the impact on soil microbial communities and their dynamics is not known. We assessed changes in the soil microbial communities in response to willow chip applied at increasing rates (0, 20, 40, and 60 Mg ha<sup>-1</sup>) in a potato-barley cropping system. Bacterial and fungal community diversity, relative abundance, and potential functions were assessed using amplicon sequencing of 16S and ITS rRNA genes at six time points. High rates (40 and 60 Mg ha<sup>-1</sup>) of willow chips had no effect on bacterial alpha diversity but significantly decreased fungal alpha diversity (Shannon) while increasing fungal richness (Chao-1). At rates of 40 Mg ha<sup>-1</sup> and higher, the relative abundance of copiotrophic bacterial groups increased, while that of copiotrophic fungal groups decreased. The relative abundance of the most dominant microbial phyla and genera varied over time, with copiotrophic groups declining and oligotrophic groups increasing. High willow chip application rates increased bacterial molecular markers related to carbon fixation and degradation, nitrogen fixation, and phosphorus solubilization, while decreasing markers related to cellobiose transport and denitrification. This study demonstrates the ability of willow chips to influence the microbial community composition and potential function over time.</p>\",\"PeriodicalId\":9381,\"journal\":{\"name\":\"Canadian journal of microbiology\",\"volume\":\" \",\"pages\":\"1-20\"},\"PeriodicalIF\":1.8000,\"publicationDate\":\"2025-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Canadian journal of microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1139/cjm-2024-0110\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Canadian journal of microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1139/cjm-2024-0110","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
在土壤中添加灌柳片可以改善低有机质土壤的化学、物理和生物特性,但对土壤微生物群落及其动态的影响尚不清楚。在马铃薯-大麦种植系统中,我们评估了柳树片在增加施用量(0、20、40和60 Mg ha-1)下土壤微生物群落的变化。利用16S和ITS rRNA基因扩增子测序在6个时间点评估细菌和真菌群落多样性、相对丰度和潜在功能。高剂量(40和60 Mg ha-1)处理对细菌α多样性没有影响,但显著降低了真菌α多样性(Shannon),增加了真菌丰富度(Chao-1)。在40 Mg ha - 1或更高的速率下,共生菌群的相对丰度增加,而共生真菌群的相对丰度减少。最具优势的微生物门和属的相对丰度随时间的变化而变化,共营养类群减少,寡营养类群增加。较高的柳屑施用量增加了与碳固定和降解、固氮和磷增溶有关的细菌分子标记,而降低了与纤维素二糖运输和反硝化有关的标记。本研究表明,随着时间的推移,柳条对微生物群落组成和潜在功能的影响。
The application of shrub willow chip organic amendments impacts soil microbial community dynamics.
Incorporating shrub willow chips into soil may improve the chemical, physical, and biological properties of soils with low organic matter but the impact on soil microbial communities and their dynamics is not known. We assessed changes in the soil microbial communities in response to willow chip applied at increasing rates (0, 20, 40, and 60 Mg ha-1) in a potato-barley cropping system. Bacterial and fungal community diversity, relative abundance, and potential functions were assessed using amplicon sequencing of 16S and ITS rRNA genes at six time points. High rates (40 and 60 Mg ha-1) of willow chips had no effect on bacterial alpha diversity but significantly decreased fungal alpha diversity (Shannon) while increasing fungal richness (Chao-1). At rates of 40 Mg ha-1 and higher, the relative abundance of copiotrophic bacterial groups increased, while that of copiotrophic fungal groups decreased. The relative abundance of the most dominant microbial phyla and genera varied over time, with copiotrophic groups declining and oligotrophic groups increasing. High willow chip application rates increased bacterial molecular markers related to carbon fixation and degradation, nitrogen fixation, and phosphorus solubilization, while decreasing markers related to cellobiose transport and denitrification. This study demonstrates the ability of willow chips to influence the microbial community composition and potential function over time.
期刊介绍:
Published since 1954, the Canadian Journal of Microbiology is a monthly journal that contains new research in the field of microbiology, including applied microbiology and biotechnology; microbial structure and function; fungi and other eucaryotic protists; infection and immunity; microbial ecology; physiology, metabolism and enzymology; and virology, genetics, and molecular biology. It also publishes review articles and notes on an occasional basis, contributed by recognized scientists worldwide.