电化学系统建模的等变神经网络套件。

IF 5.5 1区 化学 Q2 CHEMISTRY, PHYSICAL
Journal of Chemical Theory and Computation Pub Date : 2025-02-11 Epub Date: 2025-01-30 DOI:10.1021/acs.jctc.4c01570
Jichen Li, Lisanne Knijff, Zhan-Yun Zhang, Linnéa Andersson, Chao Zhang
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引用次数: 0

摘要

电化学储能与转换在全球电气化和可持续发展中发挥着越来越重要的作用。其中一个关键的挑战是理解、控制和设计具有原子精度的电化学能源材料。这需要由机器学习(ML)技术驱动的分子建模输入。在这项工作中,我们升级了我们的配对交互神经网络Python包PiNN,方法是在PiNet2架构中引入等变特征,用于拟合势能面,PiNet2偶极子用于偶极子和电荷预测,PiNet2偶极子用于生成原子凝聚电荷响应核。通过对可公开访问的小分子、晶体材料和液体电解质的数据集进行基准测试,我们发现等变PiNet2比原始的PiNet体系结构有了显著的改进,并提供了最先进的整体性能。此外,利用插件(如PiNNAcLe)用于生成ML电位的自适应动态学习工作流,以及用于在外部偏置下建模异质电极的PiNNwall,我们希望PiNN能够作为电化学系统分子建模的多功能高性能ML加速平台。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
PiNN: Equivariant Neural Network Suite for Modeling Electrochemical Systems.

Electrochemical energy storage and conversion play increasingly important roles in electrification and sustainable development across the globe. A key challenge therein is to understand, control, and design electrochemical energy materials with atomistic precision. This requires inputs from molecular modeling powered by machine learning (ML) techniques. In this work, we have upgraded our pairwise interaction neural network Python package PiNN via introducing equivariant features to the PiNet2 architecture for fitting potential energy surfaces along with PiNet2-dipole for dipole and charge predictions as well as PiNet2-χ for generating atom-condensed charge response kernels. By benchmarking publicly accessible data sets of small molecules, crystalline materials, and liquid electrolytes, we found that the equivariant PiNet2 shows significant improvements over the original PiNet architecture and provides a state-of-the-art overall performance. Furthermore, leveraging on plug-ins such as PiNNAcLe for an adaptive learn-on-the-fly workflow in generating ML potentials and PiNNwall for modeling heterogeneous electrodes under external bias, we expect PiNN to serve as a versatile and high-performing ML-accelerated platform for molecular modeling of electrochemical systems.

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来源期刊
Journal of Chemical Theory and Computation
Journal of Chemical Theory and Computation 化学-物理:原子、分子和化学物理
CiteScore
9.90
自引率
16.40%
发文量
568
审稿时长
1 months
期刊介绍: The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.
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