基于生物信息学和分子对接的多囊卵巢综合征氧化应激相关生物标志物及抗氧化药物筛选

IF 2.6 3区 医学 Q2 OBSTETRICS & GYNECOLOGY
Reproductive Sciences Pub Date : 2025-05-01 Epub Date: 2025-01-28 DOI:10.1007/s43032-025-01790-1
Lanhui Chen, Tian Li, Jialiang Xu, Siqi Liao, Haocheng Xu, Kun Li, Deyana Ivanova, Yuewen Si, Xin Zhang, Jianning Zhang, Fangfang Li, Xuemei Chen, Yingxiong Wang, Biao Xie, Dan Shi, Meijiao Wang
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引用次数: 0

摘要

多囊卵巢综合征(PCOS)是一种影响育龄妇女的常见内分泌和代谢疾病。氧化应激(OS)在PCOS的发生发展中起重要作用。使用抗氧化剂降低OS并维持体内健康平衡可能是治疗PCOS的一种新方法。本研究分析了来自Gene Expression Omnibus数据库的转录组数据,重点分析了与OS相关的基因。通过实施两种机器学习算法,成功识别了三个与操作系统相关的生物标志物- hmox1, MMP9和klf2。为了评估这些生物标志物的诊断潜力,采用了逻辑回归模型。此外,我们还收集了健康个体和不孕PCOS女性的颗粒细胞,并通过实时荧光定量PCR实验验证了HMOX1、MMP9和KLF2的可靠性。此外,通过药物特征数据库预测靶向HMOX1和MMP9基因编码蛋白的小分子药物。药物与蛋白质的分子对接确定了两种抗氧化剂,丁蛋白和去甲氧基姜黄素,作为多囊卵巢综合征治疗的潜在候选者。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Screening of Oxidative Stress-related Biomarkers and Antioxidant Drugs for Polycystic Ovary Syndrome Based on Bioinformatics and Molecular Docking.

Polycystic ovary syndrome (PCOS) is a prevalent endocrine and metabolic disorder affecting women of reproductive age. Oxidative stress (OS) is suggested to play a significant role in the development of PCOS. Using antioxidants to reduce OS and maintain a healthy balance in the body could be a novel treatment approach for PCOS. This study analyzed transcriptome data from the Gene Expression Omnibus database, focusing on genes associated with OS. By implementing two machine learning algorithms, three OS-related biomarkers-HMOX1, MMP9, and KLF2-were successfully identified. To evaluate the diagnostic potential of these biomarkers, a Logistic regression model was employed. Additionally, granulosa cells were collected from healthy individuals and infertile women with PCOS, and the reliability of HMOX1, MMP9, and KLF2 was verified by quantitative real-time PCR experiments. Furthermore, small molecule drugs targeting proteins encoded by genes HMOX1 and MMP9 were predicted through the Drug Signature Database. Molecular docking of drugs to proteins identified two antioxidants, butein and demethoxycurcumin, as potential candidates for PCOS therapy.

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来源期刊
Reproductive Sciences
Reproductive Sciences 医学-妇产科学
CiteScore
5.50
自引率
3.40%
发文量
322
审稿时长
4-8 weeks
期刊介绍: Reproductive Sciences (RS) is a peer-reviewed, monthly journal publishing original research and reviews in obstetrics and gynecology. RS is multi-disciplinary and includes research in basic reproductive biology and medicine, maternal-fetal medicine, obstetrics, gynecology, reproductive endocrinology, urogynecology, fertility/infertility, embryology, gynecologic/reproductive oncology, developmental biology, stem cell research, molecular/cellular biology and other related fields.
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