Zhongzhe Li, Wenting Geng, Beilei Yu, Bin Wang, Shuxuan Sun, Lu Zhou
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SRT1720-targeted genes were obtained through databases such as Chembl, TTD, GtoPdb, and so on. All target genes were standardized by the Uniprot database and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were identified by STRING. Shared KEGG pathways were identified using a Venn diagram among SRT1720-targeted pathways and HIRI. Furthermore, experimental techniques such as cell apoptosis assay and western blotting were used to confirm the most significant biological processes and the key pathway between SRT1720-targeted and HIRI.</p><p><strong>Results: </strong>This study identified 118 HIRI-related DEGs, 69 shared KEGG pathways of SRT1720 and HIRI. In addition, the findings revealed that SRT1720 significantly reduced liver ischemiareperfusion (I/R) injury. NF-κB signaling pathway and the expression of promoting apoptosis factors such as Bax and Caspase3 were inhibited, while antiapoptotic protein Bcl-2 was promoted in the SRT1720 group compared with the I/R group.</p><p><strong>Conclusion: </strong>The findings indicate that SRT1720 may inhibit the development of HIRI by inhibiting the NF-κB signaling pathway and reducing cell apoptosis, acting as a treatment for HIRI.</p>","PeriodicalId":11076,"journal":{"name":"Current topics in medicinal chemistry","volume":" ","pages":""},"PeriodicalIF":2.9000,"publicationDate":"2025-01-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"SRT1720 Treatments Hepatic Ischemia Reperfusion Injury by Regulation of NF-κB Signaling Pathways and Reduce Cell Apoptosis: From Network Pharmacology to Experimental Validation.\",\"authors\":\"Zhongzhe Li, Wenting Geng, Beilei Yu, Bin Wang, Shuxuan Sun, Lu Zhou\",\"doi\":\"10.2174/0115680266322450241212070042\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background and objective: </strong>Hepatic ischemia reperfusion injury (HIRI) is a common complication closely related to the prognosis of liver surgery, and effective treatment methods are still unavailable. 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引用次数: 0
摘要
背景与目的:肝缺血再灌注损伤(liver ischemia reperfusion injury, HIRI)是肝脏外科手术中一种常见的并发症,与预后密切相关,目前尚无有效的治疗方法。SRT1720具有多功能、多靶点的特点,可应对HIRI引起的多向复杂病理过程。本研究旨在通过网络药理学、体外实验和体内模型相结合的方法,探讨SRT1720在HIRI中的潜在作用机制。方法:基于GSE15480和Genecards数据库对差异表达基因(DEGs)进行鉴定。然后进行富集分析。通过Chembl、TTD、GtoPdb等数据库获得srt1720靶向基因。所有靶基因通过Uniprot数据库标准化,京都基因与基因组百科全书(Kyoto Encyclopedia of genes and Genomes, KEGG)通路通过STRING进行鉴定。利用Venn图在srt1720靶向通路和HIRI之间确定了共享的KEGG通路。此外,我们还利用细胞凋亡实验和western blotting等实验技术来确认srt1720靶向与HIRI之间最重要的生物学过程和关键途径。结果:本研究鉴定出118个HIRI相关基因,69个SRT1720与HIRI共有KEGG通路。此外,研究结果显示SRT1720可显著降低肝脏缺血再灌注(I/R)损伤。与I/R组相比,SRT1720组NF-κB信号通路及促凋亡因子Bax、Caspase3的表达受到抑制,抗凋亡蛋白Bcl-2表达受到促进。结论:SRT1720可能通过抑制NF-κB信号通路、减少细胞凋亡来抑制HIRI的发展,对HIRI有治疗作用。
SRT1720 Treatments Hepatic Ischemia Reperfusion Injury by Regulation of NF-κB Signaling Pathways and Reduce Cell Apoptosis: From Network Pharmacology to Experimental Validation.
Background and objective: Hepatic ischemia reperfusion injury (HIRI) is a common complication closely related to the prognosis of liver surgery, and effective treatment methods are still unavailable. SRT1720 has the characteristics of multifunction and multitarget which may cope with the multidirectional complex pathological process caused by HIRI. The present study aimed to explore the potential mechanism of SRT1720 in HIRI through a combination of network pharmacology, in vitro experiments and in vivo models.
Methods: Differentially expressed genes (DEGs) were identified based on the GSE15480 and Genecards database. Enrichment analyses were then conducted. SRT1720-targeted genes were obtained through databases such as Chembl, TTD, GtoPdb, and so on. All target genes were standardized by the Uniprot database and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were identified by STRING. Shared KEGG pathways were identified using a Venn diagram among SRT1720-targeted pathways and HIRI. Furthermore, experimental techniques such as cell apoptosis assay and western blotting were used to confirm the most significant biological processes and the key pathway between SRT1720-targeted and HIRI.
Results: This study identified 118 HIRI-related DEGs, 69 shared KEGG pathways of SRT1720 and HIRI. In addition, the findings revealed that SRT1720 significantly reduced liver ischemiareperfusion (I/R) injury. NF-κB signaling pathway and the expression of promoting apoptosis factors such as Bax and Caspase3 were inhibited, while antiapoptotic protein Bcl-2 was promoted in the SRT1720 group compared with the I/R group.
Conclusion: The findings indicate that SRT1720 may inhibit the development of HIRI by inhibiting the NF-κB signaling pathway and reducing cell apoptosis, acting as a treatment for HIRI.
期刊介绍:
Current Topics in Medicinal Chemistry is a forum for the review of areas of keen and topical interest to medicinal chemists and others in the allied disciplines. Each issue is solely devoted to a specific topic, containing six to nine reviews, which provide the reader a comprehensive survey of that area. A Guest Editor who is an expert in the topic under review, will assemble each issue. The scope of Current Topics in Medicinal Chemistry will cover all areas of medicinal chemistry, including current developments in rational drug design, synthetic chemistry, bioorganic chemistry, high-throughput screening, combinatorial chemistry, compound diversity measurements, drug absorption, drug distribution, metabolism, new and emerging drug targets, natural products, pharmacogenomics, and structure-activity relationships. Medicinal chemistry is a rapidly maturing discipline. The study of how structure and function are related is absolutely essential to understanding the molecular basis of life. Current Topics in Medicinal Chemistry aims to contribute to the growth of scientific knowledge and insight, and facilitate the discovery and development of new therapeutic agents to treat debilitating human disorders. The journal is essential for every medicinal chemist who wishes to be kept informed and up-to-date with the latest and most important advances.