一种从混凝土防波堤结构生物膜中分离出来的新型海洋细菌。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Hao Feng, Shuyi Liang, Ruisi Li, Hui Wang, Runlin Cai
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引用次数: 0

摘要

海洋生物膜作为一种隐藏的微生物多样性和功能潜力的新发现。本研究从汕头沿海地区混凝土防波堤结构物的生物膜中分离出一种革兰氏染色阴性、好氧、椭圆形和非运动细菌LMIT008T。菌株LMIT008T可以在1-7% NaCl的盐度、5-8的pH和10-40℃的温度下生长。基于16S rRNA基因序列的系统发育分析表明,菌株LMIT008T属于Jannaschia属,与类型菌株Jannaschia aquimarina KCTC23555T(96.03%)和Jannaschia marina SHC-163T(95.31%)亲缘关系密切。菌株LMIT008T的草图基因组大小为3.67 Mbp,基因组DNA G+C含量为69.83 mol%。菌株LMIT008T与亲缘型菌株J. aquimarina KCTC23555T的平均核苷酸同源值为74.82%。主要的细胞脂肪酸为总特征8 (C18: 1 ω7c/C18: 1 ω6c)和C18: 0,主要的极性脂质为磷脂酰乙醇胺、磷脂酰甘油和磷脂酰胆碱。泛醌-10 (Q-10)是唯一的呼吸醌。此外,菌株LMIT008T的基因组分析表明,该菌株含有丰富的与生物膜形成和环境适应相关的基因,解释了在混凝土防波堤结构上生存的潜在策略。基于形态、系统发育、化学分类和表型特征,认为菌株LMIT008T代表了Jannaschia属的一个新种,并以LMIT008T (=MCCC 1K08854T=KCTC 8321T)为模式菌株命名为Jannaschia maritima sp. 11。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Jannaschia maritima sp. nov., a novel marine bacterium isolated from the biofilm of concrete breakwater structures.

Marine biofilms were newly revealed as a bank of hidden microbial diversity and functional potential. In this study, a Gram-stain-negative, aerobic, oval and non-motile bacterium, designated LMIT008T, was isolated from the biofilm of concrete breakwater structures located in the coastal area of Shantou, PR China. Strain LMIT008T was found to grow at salinities of 1-7% NaCl, at pH 5-8 and at temperatures 10-40 °C. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain LMIT008T belonged to the genus Jannaschia and was closely related to the type strains Jannaschia aquimarina KCTC23555T (96.03%) and Jannaschia marina SHC-163T (95.31%). The draft genome size of the strain LMIT008T was 3.67 Mbp, and the genomic DNA G+C content was 69.83 mol%. The average nucleotide identity value between strain LMIT008T and the closely related type strain J. aquimarina KCTC23555T was 74.82%. The predominant cellular fatty acids were identified as summed feature 8 (C18 : 1  ω7c/C18 : 1  ω6c) and C18 : 0, and the major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and phosphatidylcholine. Ubiquinone-10 (Q-10) is the sole respiratory quinone. Further, genomic analysis of strain LMIT008T showed that the strain harbours abundant genes associated with biofilm formation and environmental adaption, explaining the potential strategies for living on concrete breakwater structures. Based on the morphological, phylogenetic, chemotaxonomic and phenotypic characterization, the strain LMIT008T was considered to represent a novel species in the genus of Jannaschia, for which the name Jannaschia maritima sp. nov. was proposed, with LMIT008T (=MCCC 1K08854T=KCTC 8321T) as the type strain.

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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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