{"title":"蓝斑神经元发育中谷氨酸受体活性的机器学习分析。","authors":"Marjan Firouznia, Masoumeh Kourosh-Arami, Karim Faez, Saeed Semnanian, Javad Alikhani Koupaei","doi":"10.1080/00207454.2025.2450507","DOIUrl":null,"url":null,"abstract":"<p><strong>Purpose/aim: </strong>The developing brain undergoes a remarkable process of synaptic changes.</p><p><strong>Material and methods: </strong>To investigate the developmental changes in glutamatergic synaptic connections using the whole-cell patch clamp method, evoked excitatory postsynaptic currents (eEPSCs) were recorded from locus coeruleus (LC) neurons, a brain region crucial for cognitive functions, in rats at ages 7, 14, and 21 days. We employed fractal analysis to compute fractal dimensions of AMPA and NMDA receptors, serving as markers for synaptic maturation.</p><p><strong>Results: </strong>Our findings revealed a significant increase in fractal dimensions during the third postnatal week and hence a developmental chenge of synaptic connections. A strong positive correlation between amplitude and fractal dimensions, in Pearson correlation analysis suggested that the synaptic currents' amplitude is closely related to the fractal properties of the receptors. A linear relationship between fractal dimensions and age indicated that fractal analysis can be a robust tool for predicting developmental changes. Additionally, we employed machine learning techniques to predict developmental changes based on AMPA and NMDA receptors. Support Vector Machine (SVM) models outperformed random forest models in accurately predicting age-dependent developmental changes, as indicated by the area under the curve (AUC) values. SVM achieved an AUC of 0.89 for AMPA receptors and 0.86 for NMDA receptors, demonstrating the effectiveness of fractal-based features in characterizing synaptic maturation.</p><p><strong>Conclusion: </strong>This study offers valuable insights into synaptic development in the LC nucleus and demonstrates the potential of fractal analysis as a tool to understand brain plasticity and early development. Fractal dimensions play a crucial role in characterizing the maturation of glutamatergic synapses and neural circuitry development.</p>","PeriodicalId":14161,"journal":{"name":"International Journal of Neuroscience","volume":" ","pages":"1-10"},"PeriodicalIF":1.7000,"publicationDate":"2025-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Machine learning analysis of glutamate receptor activity in developing locus coeruleus neurons.\",\"authors\":\"Marjan Firouznia, Masoumeh Kourosh-Arami, Karim Faez, Saeed Semnanian, Javad Alikhani Koupaei\",\"doi\":\"10.1080/00207454.2025.2450507\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Purpose/aim: </strong>The developing brain undergoes a remarkable process of synaptic changes.</p><p><strong>Material and methods: </strong>To investigate the developmental changes in glutamatergic synaptic connections using the whole-cell patch clamp method, evoked excitatory postsynaptic currents (eEPSCs) were recorded from locus coeruleus (LC) neurons, a brain region crucial for cognitive functions, in rats at ages 7, 14, and 21 days. We employed fractal analysis to compute fractal dimensions of AMPA and NMDA receptors, serving as markers for synaptic maturation.</p><p><strong>Results: </strong>Our findings revealed a significant increase in fractal dimensions during the third postnatal week and hence a developmental chenge of synaptic connections. A strong positive correlation between amplitude and fractal dimensions, in Pearson correlation analysis suggested that the synaptic currents' amplitude is closely related to the fractal properties of the receptors. A linear relationship between fractal dimensions and age indicated that fractal analysis can be a robust tool for predicting developmental changes. Additionally, we employed machine learning techniques to predict developmental changes based on AMPA and NMDA receptors. Support Vector Machine (SVM) models outperformed random forest models in accurately predicting age-dependent developmental changes, as indicated by the area under the curve (AUC) values. SVM achieved an AUC of 0.89 for AMPA receptors and 0.86 for NMDA receptors, demonstrating the effectiveness of fractal-based features in characterizing synaptic maturation.</p><p><strong>Conclusion: </strong>This study offers valuable insights into synaptic development in the LC nucleus and demonstrates the potential of fractal analysis as a tool to understand brain plasticity and early development. 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引用次数: 0
摘要
发育中的大脑经历了一个显著的突触产生和成熟的过程,特别是在谷氨酸突触中。在这项研究中,我们着眼于蓝斑核(LC),一个对认知功能至关重要的大脑区域,研究谷氨酸突触连接的发育变化。使用全细胞膜片钳法,我们记录了大鼠在7、14和21天龄时LC神经元的诱发兴奋性突触后电流(eEPSCs)。为了评估发育变化,我们采用分形分析计算了作为突触成熟标志的AMPA和NMDA受体的分形维数。我们的研究结果显示,在出生后的第三周,分形维数显著增加,表明突触连接的复杂性和组织的发育进展。Pearson相关分析显示,分形维数与振幅呈正相关(p 2 = 0.843, p < 0.001),表明分形分析可以作为预测年龄依赖性发育变化的有力工具。此外,我们采用机器学习技术来预测基于AMPA和NMDA受体的发育变化。从曲线下面积(AUC)值可以看出,支持向量机(SVM)模型在准确预测年龄依赖性发育变化方面优于随机森林模型。SVM对AMPA受体的AUC为0.89,对NMDA受体的AUC为0.86,证明了分形特征在表征突触成熟方面的有效性。这项研究为LC核的突触发育提供了有价值的见解,并证明了分形分析作为理解大脑可塑性和早期发育的工具的潜力。分形维数在表征谷氨酸突触成熟过程中起着至关重要的作用,为进一步研究神经回路的发育提供了基础。
Machine learning analysis of glutamate receptor activity in developing locus coeruleus neurons.
Purpose/aim: The developing brain undergoes a remarkable process of synaptic changes.
Material and methods: To investigate the developmental changes in glutamatergic synaptic connections using the whole-cell patch clamp method, evoked excitatory postsynaptic currents (eEPSCs) were recorded from locus coeruleus (LC) neurons, a brain region crucial for cognitive functions, in rats at ages 7, 14, and 21 days. We employed fractal analysis to compute fractal dimensions of AMPA and NMDA receptors, serving as markers for synaptic maturation.
Results: Our findings revealed a significant increase in fractal dimensions during the third postnatal week and hence a developmental chenge of synaptic connections. A strong positive correlation between amplitude and fractal dimensions, in Pearson correlation analysis suggested that the synaptic currents' amplitude is closely related to the fractal properties of the receptors. A linear relationship between fractal dimensions and age indicated that fractal analysis can be a robust tool for predicting developmental changes. Additionally, we employed machine learning techniques to predict developmental changes based on AMPA and NMDA receptors. Support Vector Machine (SVM) models outperformed random forest models in accurately predicting age-dependent developmental changes, as indicated by the area under the curve (AUC) values. SVM achieved an AUC of 0.89 for AMPA receptors and 0.86 for NMDA receptors, demonstrating the effectiveness of fractal-based features in characterizing synaptic maturation.
Conclusion: This study offers valuable insights into synaptic development in the LC nucleus and demonstrates the potential of fractal analysis as a tool to understand brain plasticity and early development. Fractal dimensions play a crucial role in characterizing the maturation of glutamatergic synapses and neural circuitry development.
期刊介绍:
The International Journal of Neuroscience publishes original research articles, reviews, brief scientific reports, case studies, letters to the editor and book reviews concerned with problems of the nervous system and related clinical studies, epidemiology, neuropathology, medical and surgical treatment options and outcomes, neuropsychology and other topics related to the research and care of persons with neurologic disorders. The focus of the journal is clinical and transitional research. Topics covered include but are not limited to: ALS, ataxia, autism, brain tumors, child neurology, demyelinating diseases, epilepsy, genetics, headache, lysosomal storage disease, mitochondrial dysfunction, movement disorders, multiple sclerosis, myopathy, neurodegenerative diseases, neuromuscular disorders, neuropharmacology, neuropsychiatry, neuropsychology, pain, sleep disorders, stroke, and other areas related to the neurosciences.