提高UGT51催化高效生产稀有人参皂苷Rh2的效率。

IF 2.4 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Mohamed Yassin Ali, Mohnad Abdalla, Ahmed F Roumia, Mohamed A Tammam, Mohamed Fawzy Ramadan, Mohmmed Abdelssalam Hassan Edrees, Atul Kabra, Daochen Zhu
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引用次数: 0

摘要

人参皂苷Rh2(S)因其治疗多种疾病的潜力而闻名,包括一些癌症、炎症和糖尿病。酿酒酵母尿苷二磷酸糖基转移酶51 (UGT51)的酶活性在葡萄糖(供体)和原人参二醇(受体)形成人参皂苷Rh2的糖基化过程中起关键作用。然而,UGT51的催化效率仍然是一个具有挑战性的任务。为此,我们对UGT51进行定点诱变,以提高其催化效率,从而提高人参皂苷Rh2的产量。该突变结构具有4个关键突变(E805A、S998A、R1031A和L1032A),与野生型相比,具有更高的稳定性、结合亲和力和活性位点可及性。在体外条件下,三个突变体(E805A, R1031A和L1032A)的酶活性比野生菌株高10%,58%和65%。值得注意的是,双突变体R1031A/L1032A的活性增加了85%。采用以PPD为底物的补料批工艺,Rh2产量为4.663 g/L。采用分子动力学(MD)模拟研究了UGT51突变和PPD复合物的运动和动力学。均方根偏差(RMSD)分析显示,结构构象发生了实质性变化,特别是在R1031A/L1032A突变中,这与催化效率的提高有关。此外,均方根波动(RMSF)模拟研究与RMSD和溶剂可及表面积(SASA)分析一致。计算指导的定点诱变方法有望将其应用扩展到商业上重要的酶的开发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Boosting the catalytic efficiency of UGT51 for efficient production of rare ginsenoside Rh2.

Ginsenoside Rh2(S) is well-known for its therapeutic potential against diverse conditions, including some cancers, inflammation, and diabetes. The enzymatic activity of uridine diphosphate glycosyltransferase 51 (UGT51) from Saccharomyces cerevisiae plays a pivotal role in the glycosylation process between UDP-glucose (donor) and protopanaxadiol (acceptor), to form ginsenoside Rh2. However, the catalytic efficiency of the UGT51 has remained a challenging task. To this end, we employed site-directed mutagenesis on UGT51 to improve its catalytic efficiency for enhanced production of ginsenoside Rh2. The mutated structure, featuring four key mutations (E805A, S998A, R1031A, and L1032A), exhibited heightened stability, binding affinity, and active site accessibility for protopanaxadiol (PPD) compared to the wild type. Under in vitro conditions, three mutants (E805A, R1031A, and L1032A) demonstrated 10%, 58%, and 65% higher enzymatic activities compared to the wild strain. Notably, the double mutant R1031A/L1032A exhibited an 85% increase in activity. Employing a fed-batch technology with PPD as the substrate yielded a Rh2 production of 4.663 g/L. The molecular dynamics (MD) simulations were employed to investigate the movements and dynamic dynamics of UGT51 mutations and PPD complexes. The root mean square deviation (RMSD) analysis revealed substantial alterations in structural conformation, particularly in the R1031A/L1032A mutations, correlating with boosted catalytic efficiency. Furthermore, the root mean square fluctuation (RMSF) simulation study aligned with both the RMSD and the solvent-accessible surface area (SASA) analyses. The computationally guided site-directed mutagenesis approach holds promise for extending its application to the development of commercially significant enzymes.

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来源期刊
Folia microbiologica
Folia microbiologica 工程技术-生物工程与应用微生物
CiteScore
5.80
自引率
0.00%
发文量
82
审稿时长
6-12 weeks
期刊介绍: Unlike journals which specialize ever more narrowly, Folia Microbiologica (FM) takes an open approach that spans general, soil, medical and industrial microbiology, plus some branches of immunology. This English-language journal publishes original papers, reviews and mini-reviews, short communications and book reviews. The coverage includes cutting-edge methods and promising new topics, as well as studies using established methods that exhibit promise in practical applications such as medicine, animal husbandry and more. The coverage of FM is expanding beyond Central and Eastern Europe, with a growing proportion of its contents contributed by international authors.
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