原子动力学和晶体结构:一种序数模式方法。

IF 2.7 2区 化学 Q3 CHEMISTRY, PHYSICAL
The Journal of Physical Chemistry A Pub Date : 2025-01-30 Epub Date: 2025-01-17 DOI:10.1021/acs.jpca.4c06151
Rafał Abram, Roman Nowak, Dariusz Chrobak
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引用次数: 0

摘要

热波动无处不在的性质对晶体结构的识别造成了限制。然而,原子的轨迹带有其周围环境的指纹。这使得寻找一种通过分析单个原子的运动来确定局部原子结构的方法变得合理。在这里,我们报告,而使用分子模型,如何统计分析单原子速度轨迹,由有序模式表示,区分实际晶体结构。利用有序模式的香农熵可以识别所研究的高压硅相。对占据r8晶体2(c)和6(f) Wyckoff位置的原子的识别表明,所开发的方法的精度随着轨迹长度的增加而增加。提出的研究晶体结构的概念为固-固相变研究提供了新的机会。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Atom's Dynamics and Crystal Structure: An Ordinal Pattern Method.

The ubiquitous nature of thermal fluctuations poses a limitation on the identification of crystal structures. However, the trajectory of an atom carries a fingerprint of its surroundings. This rationalizes the search for a method that can determine the local atomic configuration via the analysis of the movement of an individual atom. Here, we report, while using molecular modeling, how a statistical analysis of a single-atom speed trajectory, represented by ordinal patterns, distinguishes between actual crystal structures. Using the Shannon entropy of ordinal patterns enabled discernment of the studied high-pressure silicon phases. Identification of the atoms occupying the 2(c) and 6(f) Wyckoff positions of the r8 crystal revealed an increase in the developed method's accuracy with trajectory length. The proposed concept of studying the structure of crystals offers new opportunities in solid-solid phase transformation studies.

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来源期刊
The Journal of Physical Chemistry A
The Journal of Physical Chemistry A 化学-物理:原子、分子和化学物理
CiteScore
5.20
自引率
10.30%
发文量
922
审稿时长
1.3 months
期刊介绍: The Journal of Physical Chemistry A is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, and chemical physicists.
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