[基于SSR标记的藏红花种质资源DNA分子身份证的开发]。

Q3 Pharmacology, Toxicology and Pharmaceutics
Cheng Sun, Bo-Cheng Wang, Zi-Yuan Chen, Chao Jiang, Wen-Bo Xie, Yuan Yuan
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引用次数: 0

摘要

为促进种源资源的保护与利用,并为种源新品种的选育提供依据,本研究对种源资源的遗传多样性进行了分析,并建立了种源的分子身份(ID)卡。利用从金针桃基因组中鉴定出的9个SSR标记,对65份金针桃种质资源进行了多次荧光pcr -毛细管电泳,并对扩增条带的分子量和等位基因进行了分析。根据9条SSR引物的带带模式,分析了各种质资源的遗传多样性,并对样品进行了分子ID卡的编制。结果表明,9对SSR引物共检测到78个等位基因,平均检测到8.67个。观察杂合度为0.338 ~ 0.831(平均0.601),期望杂合度为0.413 ~ 0.853(平均0.721)。香农信息指数变化范围为0.880 ~ 1.994,平均值为1.41。多态性信息含量在0.391 ~ 0.835之间,平均为0.696,具有丰富的遗传多样性。当遗传同源度为0.347时,65份材料可划分为5个类群。在此基础上,本研究利用多态性较高的5条SSR引物建立了金针叶种质资源的分子ID卡,并对云赋种质苗圃保存的49份核心种质资源建立了二维码ID卡,为金针叶新品种选育、生产利用和可追溯性奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[Development of DNA molecular identity cards for germplasm of Murraya paniculata based on SSR markers].

To promote the conservation and utilization of the germplasm resources and provide a basis for the breeding of new varieties of Murraya paniculata, this study analyzed the genetic diversity of the germplasm resources and developed the molecular identity(ID) card of M. paniculata. Multiple fluorescence PCR-capillary electrophoresis was performed for 65 germplasm accessions of M. paniculata based on 9 SSR markers identified from the M. paniculata genome, and the molecular weights and alleles of the amplified bands were analyzed. According to the banding patterns of the 9 SSR primers, this study analyzed the genetic diversity of each germplasm accession of M. paniculata and developed molecular ID cards for the test samples. The results showed that 9 pairs of SSR primers detected 78 alleles, with an average of 8.67 alleles. The observed and expected heterozygosity was 0.338-0.831(average of 0.601) and 0.413-0.853(average of 0.721), respectively. The Shannon's information index varied within the range of 0.880-1.994, with an average of 1.41. The polymorphic information content was within the range of 0.391-0.835, with an average of 0.696, which indicated rich genetic diversity. When the genetic identity was 0.347, the 65 germplasm accessions were classified into 5 groups. Based on the results, this study employed the 5 SSR primers with higher polymorphisms to develop the molecular ID cards for the germplasm resources of M. paniculata and created QR code ID cards for the 49 core germplasm accessions preserved in the Yunfu germplasm nursery, laying a foundation for the new variety breeding, production, utilization, and traceability of M. paniculata.

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来源期刊
Zhongguo Zhongyao Zazhi
Zhongguo Zhongyao Zazhi Pharmacology, Toxicology and Pharmaceutics-Pharmacology, Toxicology and Pharmaceutics (all)
CiteScore
1.50
自引率
0.00%
发文量
581
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