探索基因定位和共表达模式,阐明Tbx20在心脏生物学中的意义。

IF 2.7 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Dezhong Zhang, Xiao Shang, Quanquan Ji, Li Niu
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引用次数: 0

摘要

转录因子Tbx20是心脏发育不可或缺的一部分,在各种心脏疾病中发挥重要作用。尽管Tbx20具有重要意义,但其调控机制和功能意义尚不完全清楚。为了阐明这些机制,我们首先进行了eQTL定位,以鉴定与BXD小鼠心脏组织中Tbx20表达相关的遗传位点。共表达和富集分析揭示了与Tbx20相关的途径,包括扩张型心肌病、肥厚型心肌病和FoxO信号。此外,蛋白质相互作用研究确定了必需的心脏蛋白,如Myl2和my17,以及上游调节因子如Mef2c。为了验证我们的生物信息学发现,我们采用了定量逆转录聚合酶链反应(qRT-PCR)来评估BXD小鼠心脏组织中TBX20和Mef2c的相对mRNA表达水平,并与亲本菌株B6和D2进行了比较。结果表明,与亲本菌株相比,BXD组TBX20和Mef2c的表达均显著上调。相反,与BXD小鼠相比,B6、D2、对照组和治疗组的这两个基因均下调。这些发现证实了TBX20和Mef2c在心脏发育中的调节作用,正如我们最初的分析所建议的那样。这项研究不仅强调了Tbx20在心脏基因调控中的关键作用,而且强调了其作为心血管疾病治疗靶点的潜力。对Tbx20及其相互作用的进一步研究将增强我们对心脏生物学的理解,并有助于开发针对心脏病的靶向治疗方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Exploring genetic mapping and co-expression patterns to illuminate significance of Tbx20 in cardiac biology.

The transcription factor Tbx20 is integral to heart development and plays a significant role in various cardiac diseases. Despite its established importance, the regulatory mechanisms and functional significance of Tbx20 remain incompletely understood. To elucidate these mechanisms, we initially conducted eQTL mapping to identify genetic loci associated with Tbx20 expression in heart tissue from BXD mice. Co-expression and enrichment analyses revealed pathways linked to Tbx20, including dilated cardiomyopathy, hypertrophic cardiomyopathy, and FoxO signaling. Additionally, protein-protein interaction studies identified essential cardiac proteins, such as Myl2 and Myl7, along with upstream regulators like Mef2c. To validate our bioinformatic findings, we performed quantitative reverse transcription polymerase chain reaction (qRT-PCR) to assess the relative mRNA expression levels of TBX20 and Mef2c in the heart tissues of BXD mice compared to their parental strains (B6 and D2). Our results demonstrated significant up-regulation of both TBX20 and Mef2c in the BXD group relative to the parental strains. Conversely, both genes were down-regulated in B6, D2, Control, and Treatment groups when compared to BXD mice. These findings confirm the predicted regulatory roles of TBX20 and Mef2c in cardiac development as suggested by our initial analyses.This study not only reinforces the critical role of Tbx20 in cardiac gene regulation but also highlights its potential as a therapeutic target for cardiovascular disorders. Further investigations into Tbx20 and its interactions will enhance our understanding of heart biology and contribute to the development of targeted therapies for heart diseases.

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来源期刊
Transgenic Research
Transgenic Research 生物-生化研究方法
CiteScore
5.40
自引率
0.00%
发文量
38
审稿时长
4-8 weeks
期刊介绍: Transgenic Research focusses on transgenic and genome edited higher organisms. Manuscripts emphasizing biotechnological applications are strongly encouraged. Intellectual property, ethical issues, societal impact and regulatory aspects also fall within the scope of the journal. Transgenic Research aims to bridge the gap between fundamental and applied science in molecular biology and biotechnology for the plant and animal academic and associated industry communities. Transgenic Research publishes -Original Papers -Reviews: Should critically summarize the current state-of-the-art of the subject in a dispassionate way. Authors are requested to contact a Board Member before submission. Reviews should not be descriptive; rather they should present the most up-to-date information on the subject in a dispassionate and critical way. Perspective Reviews which can address new or controversial aspects are encouraged. -Brief Communications: Should report significant developments in methodology and experimental transgenic higher organisms
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