张德国，李志明，刘群，邓涛。神农架林区特有种葫芦科植物（Trichosanthes sunhangi）质体基因组特征及系统发育状况。

IF 0.5 4区生物学 Q4 GENETICS & HEREDITY

Mitochondrial DNA. Part B, Resources Pub Date : 2024-12-24 eCollection Date: 2025-01-01 DOI:10.1080/23802359.2024.2444606

Lufeng Liu, Jingyi Peng, Qun Liu, Yining Di

{"title":"张德国，李志明，刘群，邓涛。神农架林区特有种葫芦科植物（Trichosanthes sunhangi）质体基因组特征及系统发育状况。","authors":"Lufeng Liu, Jingyi Peng, Qun Liu, Yining Di","doi":"10.1080/23802359.2024.2444606","DOIUrl":null,"url":null,"abstract":"Trichosanthes sunhangii (Cucurbitaceae) is an endemic species native to the Shennongjia forestry district of China, whose plastid genome was reported in this study. The whole genome exhibits the typical quadripartite structure with 156,906 bp in size. A total of 130 genes were identified, containing 85 protein-coding genes (CDS), 37 tRNA, and 8 rRNA genes. Phylogenetic reconstruction based on 83 shared CDS sequences reaffirmed the status of T. sunhangii within the Sect. Foliobracteola, revealing close relationships with morphologically similar species, T. kirilowii and T. rosthornii. Our findings will provide a significant foundation for future investigations into the evolution, conservation, and potential utilization of this species.","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"10 1","pages":"1-5"},"PeriodicalIF":0.5000,"publicationDate":"2024-12-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11703028/pdf/","citationCount":"0","resultStr":"{\"title\":\"The plastid genome characters and phylogenetic status of the endemic species Trichosanthes sunhangii D. G. Zhang, Z. M. Li, Qun Liu & T. Deng 2021 (Cucurbitaceae) in the Shennongjia forestry district of China.\",\"authors\":\"Lufeng Liu, Jingyi Peng, Qun Liu, Yining Di\",\"doi\":\"10.1080/23802359.2024.2444606\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Trichosanthes sunhangii (Cucurbitaceae) is an endemic species native to the Shennongjia forestry district of China, whose plastid genome was reported in this study. The whole genome exhibits the typical quadripartite structure with 156,906 bp in size. A total of 130 genes were identified, containing 85 protein-coding genes (CDS), 37 tRNA, and 8 rRNA genes. Phylogenetic reconstruction based on 83 shared CDS sequences reaffirmed the status of T. sunhangii within the Sect. Foliobracteola, revealing close relationships with morphologically similar species, T. kirilowii and T. rosthornii. Our findings will provide a significant foundation for future investigations into the evolution, conservation, and potential utilization of this species.\",\"PeriodicalId\":18647,\"journal\":{\"name\":\"Mitochondrial DNA. Part B, Resources\",\"volume\":\"10 1\",\"pages\":\"1-5\"},\"PeriodicalIF\":0.5000,\"publicationDate\":\"2024-12-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11703028/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial DNA. Part B, Resources\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2444606\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2444606","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}

引用次数: 0

摘要

sunhangii Trichosanthes sunhangii（葫芦科）是中国神农架林区特有的植物，本研究报道了其质体基因组。整个基因组呈现典型的四分体结构，大小为156,906 bp。共鉴定出130个基因，其中蛋白质编码基因（CDS） 85个，tRNA 37个，rRNA 8个。基于83个共有CDS序列的系统发育重建确认了T. sunhangii在Foliobracteola门中的地位，揭示了T. kirilowii和T. rosthornii在形态上相似的物种之间的密切关系。本研究结果将为今后对该物种的进化、保护和利用潜力的研究提供重要的基础。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

查看原文本刊更多论文

The plastid genome characters and phylogenetic status of the endemic species Trichosanthes sunhangii D. G. Zhang, Z. M. Li, Qun Liu & T. Deng 2021 (Cucurbitaceae) in the Shennongjia forestry district of China.

Trichosanthes sunhangii (Cucurbitaceae) is an endemic species native to the Shennongjia forestry district of China, whose plastid genome was reported in this study. The whole genome exhibits the typical quadripartite structure with 156,906 bp in size. A total of 130 genes were identified, containing 85 protein-coding genes (CDS), 37 tRNA, and 8 rRNA genes. Phylogenetic reconstruction based on 83 shared CDS sequences reaffirmed the status of T. sunhangii within the Sect. Foliobracteola, revealing close relationships with morphologically similar species, T. kirilowii and T. rosthornii. Our findings will provide a significant foundation for future investigations into the evolution, conservation, and potential utilization of this species.

求助全文

通过发布文献求助，成功后即可免费获取论文全文。去求助

来源期刊

Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology

CiteScore

1.30

自引率

20.00%

发文量

670

期刊介绍： This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.