半步蛾（半步蛾）叶绿体基因组。[C. A. Mey. 1836]（菊科）及其系统发育分析。

IF 0.5 4区生物学 Q4 GENETICS & HEREDITY

Mitochondrial DNA. Part B, Resources Pub Date : 2024-12-23 eCollection Date: 2025-01-01 DOI:10.1080/23802359.2024.2444624

Chun-Yan Li, Yan-Ping Xing, Wen-Juan Hou, Yu-Tong Huang, Yan-Chang Huang, Yue-Yue Song, Ting-Guo Kang, Yan-Yun Yang, Liang Xu

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引用次数: 0

摘要

lyrata半步蒿（Hemisteptia lyrata）广泛分布于中国，其叶绿体基因组全长152,467 bp，其中大单拷贝（LSC）区83,473 bp，小单拷贝（SSC）区18,594 bp，一对反向重复区（IRs）长度为25,194 bp。GC含量为36.46%。共编码133个基因，其中蛋白编码基因88个，rRNA基因8个，trna基因37个。采用最大似然法进行系统发育分析，结果表明该属植物与雪莲属植物亲缘关系较近。本研究为水蛭的系统发育遗传学和资源开发提供了基因组资源。

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The complete chloroplast genome of Hemisteptia lyrata (Bunge) Fisch. & C. A. Mey. 1836 (Asteraceae) and its phylogenetic analysis.

Hemisteptia lyrata, widely distributed in China, has a 152,467 bp chloroplast genome with a large single-copy (LSC) region of 83,473 bp, a small single-copy (SSC) region of 18,594 bp, a pair of inverted repeat regions (IRs) of 25,194 bp in length. The GC content is 36.46%. A total of 133 genes were encoded, of which 88 were protein coding genes, eight were rRNA genes, and 37 were tRNAs. The phylogenetic analysis using the maximum-likelihood method showed that H. lyrata is closely related to the species in Saussurea. This study provides genomic resources for phylogenetic genetics and resource exploitation of H. lyrata.

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来源期刊

Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology

CiteScore

1.30

自引率

20.00%

发文量

670

期刊介绍： This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.