Dalma Márton, Milán Farkas, Anna Bedics, Erika Tóth, András Táncsics, Károly Bóka, Gergely Maróti, Erzsébet Baka, Balázs Kriszt, Mátyás Cserháti
{"title":"玉米芽孢杆菌(zeirhizosphaerae sp. nov.),从玉米(Zea mays)根表面分离,匈牙利。","authors":"Dalma Márton, Milán Farkas, Anna Bedics, Erika Tóth, András Táncsics, Károly Bóka, Gergely Maróti, Erzsébet Baka, Balázs Kriszt, Mátyás Cserháti","doi":"10.1099/ijsem.0.006628","DOIUrl":null,"url":null,"abstract":"<p><p>A novel Gram-stain-positive, rod-shaped, endospore-forming bacterium with peritrichous flagella, designated as P96<sup>T</sup> was isolated from the surface of maize roots. Strain P96<sup>T</sup> grew optimally at 28 °C, pH 7.0. The strain contained A1γ <i>meso</i>-Dpm-direct in the cell-wall peptidoglycan. The dominant polar lipids were diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylglycerol. The genome size of strain P96<sup>T</sup> was 4.8 Mb, and the G+C content was 50.01%. Phylogenomic analyses based on the whole-genome sequences classified the strain into the genus <i>Paenibacillus</i>. The digital DNA-DNA hybridization and average nucleotide identity relatedness analysis resulted in values below the threshold for prokaryotic species delineation, with the highest values observed for <i>Paenibacillus enshidis</i> KCTC 33519<sup>T</sup> (29.4 and 85.2%, respectively). Genotypic data together with phenotypic properties supported the classification of strain P96<sup>T</sup> as representative of a novel species of the genus <i>Paenibacillus</i>, for which the name <i>Paenibacillus zeirhizosphaerae</i> sp. nov. is proposed. The type strain is P96<sup>T</sup> (=LMG 32802<sup>T</sup> = NCAIM B 02678<sup>T</sup>).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 1","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Paenibacillus zeirhizosphaerae</i> sp. nov., isolated from surface of the maize (<i>Zea mays</i>) roots in a horticulture field, Hungary.\",\"authors\":\"Dalma Márton, Milán Farkas, Anna Bedics, Erika Tóth, András Táncsics, Károly Bóka, Gergely Maróti, Erzsébet Baka, Balázs Kriszt, Mátyás Cserháti\",\"doi\":\"10.1099/ijsem.0.006628\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>A novel Gram-stain-positive, rod-shaped, endospore-forming bacterium with peritrichous flagella, designated as P96<sup>T</sup> was isolated from the surface of maize roots. Strain P96<sup>T</sup> grew optimally at 28 °C, pH 7.0. The strain contained A1γ <i>meso</i>-Dpm-direct in the cell-wall peptidoglycan. The dominant polar lipids were diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylglycerol. The genome size of strain P96<sup>T</sup> was 4.8 Mb, and the G+C content was 50.01%. Phylogenomic analyses based on the whole-genome sequences classified the strain into the genus <i>Paenibacillus</i>. The digital DNA-DNA hybridization and average nucleotide identity relatedness analysis resulted in values below the threshold for prokaryotic species delineation, with the highest values observed for <i>Paenibacillus enshidis</i> KCTC 33519<sup>T</sup> (29.4 and 85.2%, respectively). Genotypic data together with phenotypic properties supported the classification of strain P96<sup>T</sup> as representative of a novel species of the genus <i>Paenibacillus</i>, for which the name <i>Paenibacillus zeirhizosphaerae</i> sp. nov. is proposed. The type strain is P96<sup>T</sup> (=LMG 32802<sup>T</sup> = NCAIM B 02678<sup>T</sup>).</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"75 1\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006628\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006628","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Paenibacillus zeirhizosphaerae sp. nov., isolated from surface of the maize (Zea mays) roots in a horticulture field, Hungary.
A novel Gram-stain-positive, rod-shaped, endospore-forming bacterium with peritrichous flagella, designated as P96T was isolated from the surface of maize roots. Strain P96T grew optimally at 28 °C, pH 7.0. The strain contained A1γ meso-Dpm-direct in the cell-wall peptidoglycan. The dominant polar lipids were diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylglycerol. The genome size of strain P96T was 4.8 Mb, and the G+C content was 50.01%. Phylogenomic analyses based on the whole-genome sequences classified the strain into the genus Paenibacillus. The digital DNA-DNA hybridization and average nucleotide identity relatedness analysis resulted in values below the threshold for prokaryotic species delineation, with the highest values observed for Paenibacillus enshidis KCTC 33519T (29.4 and 85.2%, respectively). Genotypic data together with phenotypic properties supported the classification of strain P96T as representative of a novel species of the genus Paenibacillus, for which the name Paenibacillus zeirhizosphaerae sp. nov. is proposed. The type strain is P96T (=LMG 32802T = NCAIM B 02678T).
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.