伊比利亚灰狼(Canis lupus)中犬类潜在的适应性遗传渗入。

IF 4.5 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Carlos Sarabia, Isabel Salado, Alberto Fernández-Gil, Bridgett M vonHoldt, Michael Hofreiter, Carles Vilà, Jennifer A Leonard
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引用次数: 0

摘要

随着人类活动的增加,入侵物种可能导致野生物种与密切相关的驯化物种之间的杂交事件。因此,野生物种可能携带来自家养物种的渐渗等位基因,这通常被认为对野生种群产生不利影响。相反的进化结果,适应性基因渐渗,即渐渗基因在野生物种中被积极选择,是可能的,但很少有文献记载。灰狼(Canis lupus)广泛分布在整个北极地区,经常与它们的近亲——家犬(C. familiaris)共存。尽管有充足的机会,杂交在大多数种群中很少发生。在这里,我们研究了地理上孤立的伊比利亚半岛灰狼,它们在人类改造的景观中与大量松散控制的狗共存了数千年。我们通过分析150个伊比利亚灰狼和其他欧亚灰狼以及来自欧洲和西伯利亚西部的狗的全基因组,评估了狗的入侵对当前伊比利亚灰狼种群的程度和影响。我们几乎没有发现最近的遗传渗入,而且(
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Potential Adaptive Introgression From Dogs in Iberian Grey Wolves (Canis lupus).

Invading species along with increased anthropogenization may lead to hybridization events between wild species and closely related domesticates. As a consequence, wild species may carry introgressed alleles from domestic species, which is generally assumed to yield adverse effects in wild populations. The opposite evolutionary consequence, adaptive introgression, where introgressed genes are positively selected in the wild species, is possible but has rarely been documented. Grey wolves (Canis lupus) are widely distributed across the Holarctic and frequently coexist with their close relative, the domestic dog (C. familiaris). Despite ample opportunity, hybridization rarely occurs in most populations. Here we studied the geographically isolated grey wolves of the Iberian Peninsula, who have coexisted with a large population of loosely controlled dogs for thousands of years in a human-modified landscape. We assessed the extent and impact of dog introgression on the current Iberian grey wolf population by analysing 150 whole genomes of Iberian and other Eurasian grey wolves as well as dogs originating from across Europe and western Siberia. We identified almost no recent introgression and a small (< 5%) overall ancient dog ancestry. Using a combination of single scan statistics and ancestry enrichment estimates, we identified positive selection on six genes (DAPP1, NSMCE4A, MPPED2, PCDH9, MBTPS1, and CDH13) for which wild Iberian wolves carry alleles introgressed from dogs. The genes with introgressed and positively selected alleles include functions in immune response and brain functions, which may explain some of the unique behavioural phenotypes in Iberian wolves such as their reduced dispersal compared to other wolf populations.

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来源期刊
Molecular Ecology
Molecular Ecology 生物-进化生物学
CiteScore
8.40
自引率
10.20%
发文量
472
审稿时长
1 months
期刊介绍: Molecular Ecology publishes papers that utilize molecular genetic techniques to address consequential questions in ecology, evolution, behaviour and conservation. Studies may employ neutral markers for inference about ecological and evolutionary processes or examine ecologically important genes and their products directly. We discourage papers that are primarily descriptive and are relevant only to the taxon being studied. Papers reporting on molecular marker development, molecular diagnostics, barcoding, or DNA taxonomy, or technical methods should be re-directed to our sister journal, Molecular Ecology Resources. Likewise, papers with a strongly applied focus should be submitted to Evolutionary Applications. Research areas of interest to Molecular Ecology include: * population structure and phylogeography * reproductive strategies * relatedness and kin selection * sex allocation * population genetic theory * analytical methods development * conservation genetics * speciation genetics * microbial biodiversity * evolutionary dynamics of QTLs * ecological interactions * molecular adaptation and environmental genomics * impact of genetically modified organisms
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