Huan-Zhan Zhou , Bu-Qing Wang , Yong-Hong Ma , Yu-Ying Sun , Huan-Lin Zhou , Zhen Song , Yuan Zhao , Wei Chen , Jie Min , Jing-Wen Li , Tao He
{"title":"宏基因组学和代谢组学的结合揭示了氮肥施用对水稻固定修复镉的再活化和根际微生物演替的影响","authors":"Huan-Zhan Zhou , Bu-Qing Wang , Yong-Hong Ma , Yu-Ying Sun , Huan-Lin Zhou , Zhen Song , Yuan Zhao , Wei Chen , Jie Min , Jing-Wen Li , Tao He","doi":"10.1016/j.jhazmat.2025.137117","DOIUrl":null,"url":null,"abstract":"<div><div>The remobilization of cadmium (Cd) in contaminated farmland soil due to nitrogen fertilizer addition has raised significant concerns regarding the effectiveness of immobilization remediation. This study investigated the effects of ammonia nitrogen (NH<sub>4</sub><sup>+</sup>-N) and nitrogen (NO<sub>3</sub><sup>-</sup>-N) application (100 kg/ha) on the remobilization of immobilization of remediation Cd (bound to clay palygorskite) during various growth stages of rice through field experiments. Our findings revealed that increased organic acid secretion (e.g., benzoic acid and malic acid) from rice roots, induced by NH<sub>4</sub><sup>+</sup>-N, significantly enhanced the NH<sub>4</sub>NO<sub>3</sub>-extractable Cd content. Consequently, the concentration of Cd in brown rice varied from 39.84 to 43.25 μg/kg to 78.31–90.44 μg/kg. While NO<sub>3</sub><sup>-</sup>-N exhibited a relatively weaker capacity for Cd remobilization (Cd content in brown rices: 50.17–65.23 μg/kg). Meanwhile, the organic acid secretion in roots inhibited the expression of most functional genes (e.g., <em>nifK</em> and <em>napA</em>), leading to shifts in microbial communities and functional metabolism (e.g., Cd<sup>2+</sup> exporting). According to the results of metagenome-assembled genome (MAG) composition, specific MAGs with fewer functional annotations were enriched under NH<sub>4</sub><sup>+</sup>-N treatment, may further increased risk of Cd exposure in rice by stimulating <em>amt</em> expression. Interaction analysis of metabolic products and microbial communities indicated acids linked to branched-chain amino acid (BCAA) metabolism and urea cycle might serve as a potentially key process influencing microbial dynamics.</div></div>","PeriodicalId":361,"journal":{"name":"Journal of Hazardous Materials","volume":"487 ","pages":"Article 137117"},"PeriodicalIF":11.3000,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"The combination of metagenomics and metabolomics reveals the effect of nitrogen fertilizer application driving the remobilization of immobilization remediation cadmium and rhizosphere microbial succession in rice\",\"authors\":\"Huan-Zhan Zhou , Bu-Qing Wang , Yong-Hong Ma , Yu-Ying Sun , Huan-Lin Zhou , Zhen Song , Yuan Zhao , Wei Chen , Jie Min , Jing-Wen Li , Tao He\",\"doi\":\"10.1016/j.jhazmat.2025.137117\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The remobilization of cadmium (Cd) in contaminated farmland soil due to nitrogen fertilizer addition has raised significant concerns regarding the effectiveness of immobilization remediation. This study investigated the effects of ammonia nitrogen (NH<sub>4</sub><sup>+</sup>-N) and nitrogen (NO<sub>3</sub><sup>-</sup>-N) application (100 kg/ha) on the remobilization of immobilization of remediation Cd (bound to clay palygorskite) during various growth stages of rice through field experiments. Our findings revealed that increased organic acid secretion (e.g., benzoic acid and malic acid) from rice roots, induced by NH<sub>4</sub><sup>+</sup>-N, significantly enhanced the NH<sub>4</sub>NO<sub>3</sub>-extractable Cd content. Consequently, the concentration of Cd in brown rice varied from 39.84 to 43.25 μg/kg to 78.31–90.44 μg/kg. While NO<sub>3</sub><sup>-</sup>-N exhibited a relatively weaker capacity for Cd remobilization (Cd content in brown rices: 50.17–65.23 μg/kg). Meanwhile, the organic acid secretion in roots inhibited the expression of most functional genes (e.g., <em>nifK</em> and <em>napA</em>), leading to shifts in microbial communities and functional metabolism (e.g., Cd<sup>2+</sup> exporting). According to the results of metagenome-assembled genome (MAG) composition, specific MAGs with fewer functional annotations were enriched under NH<sub>4</sub><sup>+</sup>-N treatment, may further increased risk of Cd exposure in rice by stimulating <em>amt</em> expression. Interaction analysis of metabolic products and microbial communities indicated acids linked to branched-chain amino acid (BCAA) metabolism and urea cycle might serve as a potentially key process influencing microbial dynamics.</div></div>\",\"PeriodicalId\":361,\"journal\":{\"name\":\"Journal of Hazardous Materials\",\"volume\":\"487 \",\"pages\":\"Article 137117\"},\"PeriodicalIF\":11.3000,\"publicationDate\":\"2025-01-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Hazardous Materials\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0304389425000299\",\"RegionNum\":1,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, ENVIRONMENTAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Hazardous Materials","FirstCategoryId":"93","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0304389425000299","RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, ENVIRONMENTAL","Score":null,"Total":0}
The combination of metagenomics and metabolomics reveals the effect of nitrogen fertilizer application driving the remobilization of immobilization remediation cadmium and rhizosphere microbial succession in rice
The remobilization of cadmium (Cd) in contaminated farmland soil due to nitrogen fertilizer addition has raised significant concerns regarding the effectiveness of immobilization remediation. This study investigated the effects of ammonia nitrogen (NH4+-N) and nitrogen (NO3--N) application (100 kg/ha) on the remobilization of immobilization of remediation Cd (bound to clay palygorskite) during various growth stages of rice through field experiments. Our findings revealed that increased organic acid secretion (e.g., benzoic acid and malic acid) from rice roots, induced by NH4+-N, significantly enhanced the NH4NO3-extractable Cd content. Consequently, the concentration of Cd in brown rice varied from 39.84 to 43.25 μg/kg to 78.31–90.44 μg/kg. While NO3--N exhibited a relatively weaker capacity for Cd remobilization (Cd content in brown rices: 50.17–65.23 μg/kg). Meanwhile, the organic acid secretion in roots inhibited the expression of most functional genes (e.g., nifK and napA), leading to shifts in microbial communities and functional metabolism (e.g., Cd2+ exporting). According to the results of metagenome-assembled genome (MAG) composition, specific MAGs with fewer functional annotations were enriched under NH4+-N treatment, may further increased risk of Cd exposure in rice by stimulating amt expression. Interaction analysis of metabolic products and microbial communities indicated acids linked to branched-chain amino acid (BCAA) metabolism and urea cycle might serve as a potentially key process influencing microbial dynamics.
期刊介绍:
The Journal of Hazardous Materials serves as a global platform for promoting cutting-edge research in the field of Environmental Science and Engineering. Our publication features a wide range of articles, including full-length research papers, review articles, and perspectives, with the aim of enhancing our understanding of the dangers and risks associated with various materials concerning public health and the environment. It is important to note that the term "environmental contaminants" refers specifically to substances that pose hazardous effects through contamination, while excluding those that do not have such impacts on the environment or human health. Moreover, we emphasize the distinction between wastes and hazardous materials in order to provide further clarity on the scope of the journal. We have a keen interest in exploring specific compounds and microbial agents that have adverse effects on the environment.