天体生物学模拟中Fe3P Schreibersite密度功能紧密结合模型的建立。

IF 2.8 2区 化学 Q3 CHEMISTRY, PHYSICAL
The Journal of Physical Chemistry A Pub Date : 2025-01-16 Epub Date: 2025-01-06 DOI:10.1021/acs.jpca.4c05881
Riccardo Dettori, Nir Goldman
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引用次数: 0

摘要

矿物schreiberite,例如Fe3P,通常在富铁陨石中发现,并且可能作为益生元化学的非生物磷源。然而,其降解化学的原子计算通常需要量子模拟方法,这对于研究这一过程的足够时间和长度尺度来说计算太麻烦。在这方面,我们通过采用现有的半自动化工作流程,通过切比雪夫多项式的线性组合表示多体相互作用,为含铁和含磷材料创建了一个计算效率高的半经验量子密度泛函紧密结合(DFTB)模型。我们使用了一个相对较小的训练集来优化DFTB模型,该模型准确地反映了schreibersite的物理和化学性质,包括其体积性质、表面能和吸水率。然后我们表明,我们的模型显示出对几种磷化铁固体以及铁金属的多种同素异形体的强转移性。我们得到的DFTB参数化将使我们能够在比标准量子方法更长的时间和长度尺度上询问schreibersite的水分解,为其在早期地球上的益生元化学中的作用提供更详细的研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Creation of an Fe3P Schreibersite Density Functional Tight Binding Model for Astrobiological Simulations.

The mineral schreibersite, e.g., Fe3P, is commonly found in iron-rich meteorites and could have served as an abiotic phosphorus source for prebiotic chemistry. However, atomistic calculations of its degradation chemistry generally require quantum simulation approaches, which can be too computationally cumbersome to study sufficient time and length scales for this process. In this regard, we have created a computationally efficient semiempirical quantum density functional tight binding (DFTB) model for iron and phosphorus-containing materials by adopting an existing semiautomated workflow that represents many-body interactions by linear combinations of Chebyshev polynomials. We have utilized a relatively small training set to optimize a DFTB model that is accurate for schreibersite physical and chemical properties, including its bulk properties, surface energies, and water absorption. We then show that our model shows strong transferability to several iron phosphide solids as well as multiple allotropes of iron metal. Our resulting DFTB parametrization will allow us to interrogate schreibersite aqueous decomposition at longer time and length scales than standard quantum approaches, providing for more detailed investigations of its role in prebiotic chemistry on early Earth.

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来源期刊
The Journal of Physical Chemistry A
The Journal of Physical Chemistry A 化学-物理:原子、分子和化学物理
CiteScore
5.20
自引率
10.30%
发文量
922
审稿时长
1.3 months
期刊介绍: The Journal of Physical Chemistry A is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, and chemical physicists.
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