肠组织的链接谱识别结直肠癌的新生物标志物。

IF 3.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Chong Xiao, Hao Wu, Jing Long, Fengming You, Xueke Li
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引用次数: 0

摘要

肠道组织中全面的蛋白质谱分析提供了结肠直肠癌发病机制的详细信息。本研究利用Olink技术量化了52例结直肠癌患者肿瘤、配对癌旁组织和远端正常组织中92种肿瘤相关蛋白的表达水平。正常组织的蛋白质组学特征与癌旁组织非常相似,而与肿瘤组织的蛋白质组学特征明显不同。在肿瘤与正常组织之间鉴定的68个差异表达蛋白(DEPs)中,WISP-1、ESM-1和TFPI-2的变化最为明显,并表现出相对较强的相关性。这些标记在区分组织类型方面也具有最高的AUC值。dep的生物信息学分析显示,质膜和PI3K-AKT信号通路是GO和KEGG信号通路中最富集的。此外,虽然TFPI-2通常被认为是一种肿瘤抑制因子,但Olink和酶联免疫吸附试验(ELISA)分析表明,与配对的正常组织相比,其在肿瘤中的表达显著升高。据我们所知,这是第一个使用Olink技术分析肠道组织蛋白质组的研究。这项工作为CRC的潜在生物标志物和治疗靶点提供了有价值的见解,补充了循环蛋白的Olink分析。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Olink Profiling of Intestinal Tissue Identifies Novel Biomarkers For Colorectal Cancer.

Comprehensive protein profiling in intestinal tissues provides detailed information about the pathogenesis of colorectal cancer (CRC). This study quantified the expression levels of 92 oncology-related proteins in tumors, paired para-carcinoma tissues, and remote normal tissues from a cohort of 52 CRC patients utilizing the Olink technology. The proteomic profile of normal tissues closely resembled that of para-carcinoma tissues while distinctly differing from that of tumors. Among the 68 differentially expressed proteins (DEPs) identified between the tumor and normal tissues, WISP-1, ESM-1, and TFPI-2 showed the most pronounced alterations and exhibited relatively strong correlations. These markers also presented the highest AUC values for distinguishing between tissue types. Bioinformatic analysis of the DEPs revealed that the plasma membrane and the PI3K-AKT signaling pathway were among the most enriched GO terms and KEGG pathways. Furthermore, although TFPI-2 is typically recognized as a tumor suppressor, both Olink and enzyme linked immunosorbent assay (ELISA) analyses have demonstrated that its expression is significantly elevated in tumors compared with paired normal tissues. To the best of our knowledge, this is the first study to profile the proteome of intestinal tissue using the Olink technology. This work offers valuable insights into potential biomarkers and therapeutic targets for CRC, complementing the Olink profiling of circulating proteins.

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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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