苯达莫司汀和美法兰在水中抗血癌作用的量子化学研究。

IF 4.3 3区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY
ACS Omega Pub Date : 2024-12-18 eCollection Date: 2024-12-31 DOI:10.1021/acsomega.4c08646
Roman Boča, Juraj Štofko, Miriam Ladická, Cyril Rajnák
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引用次数: 0

摘要

混合B3LYP版本的密度泛函数理论应用于全几何优化,然后对作为抗血癌剂的芥菜类分子:美伐兰和苯达莫司汀进行了振动分析。所有的计算都以水为溶剂进行。除了基态性质(偶极矩、四极矩、偶极极化率、溶剂化表面和体积、零点振动能、总熵项)外,还评估了表征绝热氧化还原过程的性质(电离能、电子亲和性、分子电负性、化学硬度、亲电性指数)以及绝对氧化和还原电位。计算了振动频率,并对前沿轨道进行了显示和分析。苯达莫司汀和梅尔法兰的典型(氨基酸,A)形式具有非常低的电离能E i = 4.85 eV,因此根据反应的吉布斯能,氧化势E ox o = -4.92 V(绝对值)较低;这表明具有相当的抗氧化能力。与苯达莫司汀相反,两性离子(Z)形式的美法兰在水中更稳定,苯达莫司汀的Z形式在水中更不稳定:ΔG Z- a分别= -2.7和2.9 kcal mol-1。盐酸苯达莫司汀(苯达莫司汀)和盐酸melphalan (melphalanium)的阳离子残基除了Bd-Z有非常大的偶极矩(p = 29.7 debye)外,其性质基本上与标准形式相似。所有的计算都使用从头算后hartrei - fock方法DLPNO-CCSD(T)进行改进,该方法是“金标准耦合簇理论”CCSD(T)的一种变体,占相关能的主要部分(DLPNO-CCSD(T)-域定域对自然轨道-耦合簇单+双+三重方法)。通过ΔG Z-A = 4.8 kcal mol-1证实了(1)苯达莫司汀的标准形式比两性离子形式在水中更稳定;(ii)电离能E i = 5.10 eV低,绝对氧化电位E ox* = -5.10 V,抗氧化能力增强;(3)苯达莫司汀的氧化还原性质类似于苯达莫司汀的两性离子形式,与苯达莫司汀的标准形式有显著不同。电子-质子耦合转移的能量谱表明,SET-PT机制比同时发生的SPLET机制在更低的势垒上进行。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Quantum Chemical Studies of Bendamustine and Melphalan in Water as Antiblood Cancer Agents.

Quantum Chemical Studies of Bendamustine and Melphalan in Water as Antiblood Cancer Agents.

Quantum Chemical Studies of Bendamustine and Melphalan in Water as Antiblood Cancer Agents.

Quantum Chemical Studies of Bendamustine and Melphalan in Water as Antiblood Cancer Agents.

A hybrid B3LYP version of the Density Functional Theory was applied in full geometry optimization followed by vibrational analysis of mustard-type molecules acting as antiblood cancer agents: melphalan and bendamustine. All calculations were performed with water as a solvent. In addition to the ground-state properties (dipole moment, quadrupole moment, dipole polarizability, solvated surface and volume, zero-point vibration energy, total entropic term), properties that characterize adiabatic redox processes (ionization energy, electron affinity, molecular electronegativity, chemical hardness, electrophilicity index) together with the absolute oxidation and reduction potentials were evaluated. Vibrational frequencies were also calculated, and frontier orbitals were displayed and analyzed. Bendamustine and melphalan in their canonical (amino acid, A) forms were found to have very low ionization energies E i = 4.85 eV and consequently low (in absolute value) oxidation potentials E ox = -4.92 V based on the reaction Gibbs energies; this indicates considerable antioxidant capacity. The zwitterionic (Z) form of melphalan is more stable in water as opposite the bendamustine, for which the Z-form is less stable in water: ΔG Z-A = -2.7 and 2.9 kcal mol-1, respectively. The cationic residues of bendamustine-hydrochloride (bendamustinium) and melphalan-hydrochloride (melphalanium) have properties essentially analogous to those of the canonical forms, except for a very large dipole moment for the Bd-Z, p = 29.7 debye. All calculations were refined with the ab initio post-Hartree-Fock method DLPNO-CCSD(T), which is a variant of the "gold standard coupled cluster theory" CCSD(T) that accounts for the major part of the correlation energy (DLPNO-CCSD(T)-Domain Localized Pair Natural Orbitals-Coupled Cluster Singles + Doubles + Triples method). It is confirmed that (i) the canonical form of bendamustine is more stable in water compared to the zwitterionic form by ΔG Z-A = 4.8 kcal mol-1; (ii) low ionization energy E i = 5.10 eV causes low absolute oxidation potential E ox* = -5.10 V and increased antioxidant capacity; and (iii) the redox properties of bendamustinium are analogous to the zwitterionic form of bendamustine and are significantly different from the canonical form of bendamustine. The energy profile of electron-proton coupled transfer shows that the SET-PT mechanism proceeds over lower barriers than the concurrent SPLET mechanism.

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来源期刊
ACS Omega
ACS Omega Chemical Engineering-General Chemical Engineering
CiteScore
6.60
自引率
4.90%
发文量
3945
审稿时长
2.4 months
期刊介绍: ACS Omega is an open-access global publication for scientific articles that describe new findings in chemistry and interfacing areas of science, without any perceived evaluation of immediate impact.
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