新型第二代H1受体阻滞剂与部分分子的比较涉及DFT、分子对接、ADMET、生物靶点和活性的研究

IF 4.3 2区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY
Velid Unsal, Erkan Oner, Reşit Yıldız, Başak Doğru Mert
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引用次数: 0

摘要

尽管CAPE、褪黑素、姜黄素和维生素C等化合物的抗过敏特性在实验研究中很少被讨论,但这些著名分子的抗过敏特性从未被计算过。组胺-1受体(H1R)属于视紫红质样g蛋白偶联受体家族,在介导过敏和其他病理生理疾病的细胞中表达。本研究通过计算比较fda批准的第二代H1抗组胺药(左西替利嗪、地氯雷他定和非索非那定)的药理活性与CAPE、褪黑素、姜黄素、维生素C、ADMET(吸收、分布、代谢、排泄、毒性)谱、密度泛函数理论(DFT)、分子对接、生物学靶点和活性。由于药物开发是一个非常危险、昂贵和耗时的过程,本研究获得的数据将促进和指导未来的研究。它还将使研究人员能够专注于最有前途的化合物,提供有效的设计策略。使用基于计算机的计算技术,包括DFT、分子对接、ADMET分析、生物靶向和活性方法,对它们的药理活性进行了研究。采用分子对接法确定地氯雷他定、左西替利嗪、非索非那定、CAPE、槲皮素、褪黑素、姜黄素、维生素C配体与Desmoglein 1、Human Histamine H1受体、IgE和IL13质子的最佳结合位点,并分析结合能和相互作用状态。非索非那定与槲皮素配体表现出最有效的结合亲和力。褪黑素的Caco-2通透性最好,槲皮素、CAPE和姜黄素的PPB值处于最佳水平。在姜黄素和CAPE的OATP1B1和OATP1B3上,槲皮素对BCRP有较强的抑制作用。褪黑素和CAPE对CYP1A2的抑制值最高,而CAPE对CYP2C19和CYP2C9的抑制值最高。维生素C和槲皮素在心脏毒性和致突变风险方面被发现更安全,而地氯雷他定和左西替利嗪具有较高的神经毒性和血液毒性风险,而CAPE以其高酶抑制活性和低毒性而着称,而其他化合物的hERG阻断,DILI和细胞毒性值则指出了各种安全性问题。这项研究证明了机器学习方法在理解和发现H1受体阻滞剂方面的潜力。所得结果为制定H1受体阻滞剂临床应用的重要策略提供了重要线索。根据这些数据,CAPE和槲皮素是值得注意的分子。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Comparison of new secondgeneration H1 receptor blockers with some molecules; a study involving DFT, molecular docking, ADMET, biological target and activity

Although the antiallergic properties of compounds such as CAPE, Melatonin, Curcumin, and Vitamin C have been poorly discussed by experimental studies, the antiallergic properties of these famous molecules have never been discussed with calculations. The histamine-1 receptor (H1R) belongs to the family of rhodopsin-like G-protein-coupled receptors expressed in cells that mediate allergies and other pathophysiological diseases. In this study, pharmacological activities of FDA-approved second generation H1 antihistamines (Levocetirizine, desloratadine and fexofenadine) and molecules such as CAPE, Melatonin, Curcumin, Vitamin C, ADMET (Absorption, Distribution, Metabolism, Excretion, Toxicity) profiles, density functional theory (DFT), molecular docking, biological targets and activities were compared by calculating. Since drug development is an extremely risky, costly and time-consuming process, the data obtained in this study will facilitate and guide future studies. It will also enable researchers to focus on the most promising compounds, providing an effective design strategy. Their pharmacological activity was carried out using computer-based computational techniques including DFT, molecular docking, ADMET analysis, biological targeting, and activity methods. The best binding sites of Desloratadine, Levocetirizine, Fexofenadine, CAPE, Quercetin, Melatonin, curcumin, Vitamin C ligands to Desmoglein 1, Human Histamine H1 receptor, IgE and IL13 protons were determined by molecular docking method and binding energy and interaction states were analyzed. Fexofenadine and Quercetin ligand showed the most effective binding affinity. Melatonin had the best Caco-2 permeability PPB values of Quercetin, CAPE and Curcumin were at optimal levels. On the OATP1B1 and OATP1B3 of curcumin and CAPE, Quercetin was found to have strong inhibition effects on BCRP. Melatonin and CAPE were found to have the highest inhibition values on CYP1A2, while CAPE had the highest inhibition values on CYP2C19 and CYP2C9. Vitamin C and Quercetin were found to be safer in terms of cardiac toxicity and mutagenic risks, while Desloratadine and Levocetirizine carried high risks of neurotoxicity and hematotoxicity, while CAPE was noted for its high enzyme inhibitory activities and low toxicity profiles, while the hERG blockade, DILI, and cytotoxicity values of other compounds pointed to various safety concerns. This study demonstrated the potential of machine learning methods in understanding and discovering H1 receptor blockers. The results obtained provide important clues in the development of important strategies in the clinical use of H1 receptor blockers. In the light of these data, CAPE and Quercetin are remarkable molecules.

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来源期刊
BMC Chemistry
BMC Chemistry Chemistry-General Chemistry
CiteScore
5.30
自引率
2.20%
发文量
92
审稿时长
27 weeks
期刊介绍: BMC Chemistry, formerly known as Chemistry Central Journal, is now part of the BMC series journals family. Chemistry Central Journal has served the chemistry community as a trusted open access resource for more than 10 years – and we are delighted to announce the next step on its journey. In January 2019 the journal has been renamed BMC Chemistry and now strengthens the BMC series footprint in the physical sciences by publishing quality articles and by pushing the boundaries of open chemistry.
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