基于深度学习的超声图像中妊娠囊的分割和生物测量自动化。

IF 2.1 3区 医学 Q2 PEDIATRICS
Frontiers in Pediatrics Pub Date : 2024-12-18 eCollection Date: 2024-01-01 DOI:10.3389/fped.2024.1453302
Hafiz Muhammad Danish, Zobia Suhail, Faiza Farooq
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引用次数: 0

摘要

在妊娠早期监测妊娠囊(GS)的形态特征和测量平均囊直径(MSD)是预测自然流产和估计胎龄(GA)的必要条件。然而,手工过程是劳动密集型的,高度依赖于超声医师的专业知识。本研究旨在开发一个自动化管道,以协助超声医师准确分割GS和估计GA。方法:一个新的数据集500超声(美国)扫描,采取妊娠4至10周,准备。四个广泛使用的全卷积神经网络:UNet, UNet++, DeepLabV3和ResUNet,通过用预训练的ResNet50替换它们的编码器来修改它们。使用5倍交叉验证对这些模型进行训练和评估,以确定GS分割的最佳方法。随后,引入了一种新的生物特征来自动评估遗传算法,并将该系统的性能与超声仪的性能进行了比较。结果:ResUNet模型在所有被测架构中表现最佳,平均IoU、Dice、Recall和Precision值分别为0.946、0.978、0.987和0.958。超声医师提供的GA估计值与生物测量算法之间的差异以0.07周的平均绝对误差(MAE)进行测量。结论:该方法可替代传统的人工测量方法进行GS分割和GA估计。此外,它的潜力延伸到分割和测量其他胎儿成分在未来的研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Deep learning-based automation for segmentation and biometric measurement of the gestational sac in ultrasound images.

Introduction: Monitoring the morphological features of the gestational sac (GS) and measuring the mean sac diameter (MSD) during early pregnancy are essential for predicting spontaneous miscarriage and estimating gestational age (GA). However, the manual process is labor-intensive and highly dependent on the sonographer's expertise. This study aims to develop an automated pipeline to assist sonographers in accurately segmenting the GS and estimating GA.

Methods: A novel dataset of 500 ultrasound (US) scans, taken between 4 and 10 weeks of gestation, was prepared. Four widely used fully convolutional neural networks: UNet, UNet++, DeepLabV3, and ResUNet were modified by replacing their encoders with a pre-trained ResNet50. These models were trained and evaluated using 5-fold cross-validation to identify the optimal approach for GS segmentation. Subsequently, novel biometry was introduced to assess GA automatically, and the system's performance was compared with that of sonographers.

Results: The ResUNet model demonstrated the best performance among the tested architectures, achieving mean Intersection over Union (IoU), Dice, Recall, and Precision values of 0.946, 0.978, 0.987, and 0.958, respectively. The discrepancy between the GA estimations provided by the sonographers and the biometry algorithm was measured at a Mean Absolute Error (MAE) of 0.07 weeks.

Conclusion: The proposed pipeline offers a precise and reliable alternative to conventional manual measurements for GS segmentation and GA estimation. Furthermore, its potential extends to segmenting and measuring other fetal components in future studies.

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来源期刊
Frontiers in Pediatrics
Frontiers in Pediatrics Medicine-Pediatrics, Perinatology and Child Health
CiteScore
3.60
自引率
7.70%
发文量
2132
审稿时长
14 weeks
期刊介绍: Frontiers in Pediatrics (Impact Factor 2.33) publishes rigorously peer-reviewed research broadly across the field, from basic to clinical research that meets ongoing challenges in pediatric patient care and child health. Field Chief Editors Arjan Te Pas at Leiden University and Michael L. Moritz at the Children''s Hospital of Pittsburgh are supported by an outstanding Editorial Board of international experts. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, clinicians and the public worldwide. Frontiers in Pediatrics also features Research Topics, Frontiers special theme-focused issues managed by Guest Associate Editors, addressing important areas in pediatrics. In this fashion, Frontiers serves as an outlet to publish the broadest aspects of pediatrics in both basic and clinical research, including high-quality reviews, case reports, editorials and commentaries related to all aspects of pediatrics.
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