土壤酶活性显色分析需要缓冲液吗?改良通用缓冲液在以对硝基苯为基础的磷酸单酯酶和β-葡萄糖苷酶测定中缺点多于优点

IF 9.8 1区 农林科学 Q1 SOIL SCIENCE
Chongyang Li , Jordon Wade , Kelly Vollbracht , Diane G. Hooper , Skye A. Wills , Andrew J. Margenot
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引用次数: 0

摘要

缓冲液通常用于土壤酶测定,以在测定孵育期间保持恒定的pH值,但土壤已经被缓冲,缓冲液可以改变表观Vmax和Km。为了测试缓冲液对土壤酶活性的潜在影响,我们选择了32种土壤,提供了广泛的理化特征,并在不同的底物浓度下测定了土壤β-葡萄糖苷酶(BG)和磷酸单酯酶(PME)的活性,这些底物浓度分别是在水中或改性通用缓冲液(MUB)中。测定的pH值与测定的土壤pH值(1:2,m/v在水中)不同(高达1.6个单位),但MUB并不比水更好地维持pH值。与水相比,MUB通常抑制PME的活性(减少~ 31%)、表观Vmax(减少~ 32%)和Km(减少~ 52%),但对BG的活性(减少~ 4%)和表观Vmax(减少~ 9%)相似。与水中相比,pH值较高的土壤中MUB中PME活性的抑制程度较大。根据使用底物浓度5×Km作为酶的底物饱和度的最佳实践,在这32种土壤中测定PME的中位底物要求在水中≈50 mM g-1,在MUB中为25 mM g-1。无论基质类型如何,通常使用的PME底物浓度为10 mM g-1(例如,Tabatabai, 1994)不足以进行准确的活性测定。相比之下,对于BG分析,通常使用的10 mM g-1的pNP-linked底物浓度似乎适用于大多数土壤,水中和MUB中对底物的中值要求分别为~ 4 mM g-1和~ 6 mM g-1。我们的研究结果支持了先前的观点,即缓冲液对于测定土壤酶活性是不必要的,并且可以改变表观动力学参数(Km, Vmax)。潜在的土壤和酶特异性底物要求应事先确定,以确保准确测量土壤中的酶活性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Do chromogenic assays of soil enzyme activities need buffers? More disadvantages than advantages of modified universal buffer in the para-nitrophenyl-based assay of phosphomonoesterase and β-glucosidase activities
Buffers are commonly employed in soil enzyme activity assays to maintain a constant pH during the assay incubation, but soils are already buffered and buffer can alter apparent Vmax and Km. To test for potential artifacts of buffer on soil enzyme activities, we selected 32 soils to furnish a broad range of physicochemical characteristics and assayed soil β-glucosidase (BG) and phosphomonoesterase (PME) activities at varied substrate concentrations in water or in modified universal buffer (MUB). The pH of assays differed by up to 1.6 units from the measured soil pH (1:2, m/v in water), but MUB did not maintain pH any better than water. Compared to water, MUB generally suppressed activities (by ≈31%), apparent Vmax (by ≈32%) and Km (by ≈52%) of PME, but yielded similar activities (by ≈4% difference) and apparent Vmax (by ≈9% difference) for BG. Soils with higher pH tended to have larger degree of PME actvity suppression by MUB compared to water. Based on the best practice of using a substrate concentration that is 5 × Km to approximate substrate saturation of the enzyme, the median substrate requirement to assay PME across the 32 soils was ≈50 mM g−1 in water and 25 mM g−1 in MUB. Regardless of assay matrix, the commonly employed PME substrate concentration of 10 mM g−1 (e.g., Tabatabai, 1994) is insufficient for accurate activity assays (i.e., activities assayed at Vmax). In contrast, for BG assays the commonly used pNP-linked substrate concentration of 10 mM g−1 appears appropriate for most soils with a median substrate requirement of ≈4 mM g−1 in water and ≈6 mM g−1 in MUB. Our results support previous propositions that buffers are unnecessary for assaying soil enzyme activities and may alter apparent kinetic parameters (Km, Vmax). Potential soil- and enzyme-specific substrate requirements should be determined a priori to ensure accurate measurements of enzyme activities in soils.
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来源期刊
Soil Biology & Biochemistry
Soil Biology & Biochemistry 农林科学-土壤科学
CiteScore
16.90
自引率
9.30%
发文量
312
审稿时长
49 days
期刊介绍: Soil Biology & Biochemistry publishes original research articles of international significance focusing on biological processes in soil and their applications to soil and environmental quality. Major topics include the ecology and biochemical processes of soil organisms, their effects on the environment, and interactions with plants. The journal also welcomes state-of-the-art reviews and discussions on contemporary research in soil biology and biochemistry.
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