一项荟萃分析强调了实验室病毒进化模型中权衡取舍的特质。

IF 5.5 2区 医学 Q1 VIROLOGY
Virus Evolution Pub Date : 2024-12-06 eCollection Date: 2024-01-01 DOI:10.1093/ve/veae105
Ketty Kabengele, Wendy C Turner, Paul E Turner, C Brandon Ogbunugafor
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引用次数: 0

摘要

不同的理论框架被用来指导病毒进化的研究。其中三个比较突出的是(i)毒力的进化,(ii)生命史理论,和(iii)泛专业二分法。所有这些都涉及到定义病毒相关表型的可进化性和限制性之间的权衡。然而,尽管这些框架很受欢迎,但令人惊讶的是,对这些框架进行的直接实验室测试却很少,这些测试支持它们作为广泛适用的理论支柱的效用,可以指导我们对疾病进化的理解。在这项研究中,我们在几个广泛研究的病毒-宿主系统(植物病毒、真菌病毒、动物病毒和噬菌体)中对这三个框架的直接实验证据进行了荟萃分析。我们从28项研究中提取了60个数据集,并发现了不同分析类别(例如,框架,病毒-宿主系统)中特征之间的一系列关系。我们的工作表明,性状之间关系的直接证据是高度特异性的,特定于宿主-病毒系统和理论框架。因此,研究来自不同分类群体的病毒病原体的科学家可能会重新考虑他们对这些经典的忠诚,作为期望、解释或预测的基础。今后的努力可以受益于一致的定义,以及制定与证据相一致并适用于特定生物和生态环境的框架。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A meta-analysis highlights the idiosyncratic nature of tradeoffs in laboratory models of virus evolution.

Different theoretical frameworks have been invoked to guide the study of virus evolution. Three of the more prominent ones are (i) the evolution of virulence, (ii) life history theory, and (iii) the generalism-specialism dichotomy. All involve purported tradeoffs between traits that define the evolvability and constraint of virus-associated phenotypes. However, as popular as these frameworks are, there is a surprising paucity of direct laboratory tests of the frameworks that support their utility as broadly applicable theoretical pillars that can guide our understanding of disease evolution. In this study, we conduct a meta-analysis of direct experimental evidence for these three frameworks across several widely studied virus-host systems: plant viruses, fungal viruses, animal viruses, and bacteriophages. We extracted 60 datasets from 28 studies and found a range of relationships between traits in different analysis categories (e.g., frameworks, virus-host systems). Our work demonstrates that direct evidence for relationships between traits is highly idiosyncratic and specific to the host-virus system and theoretical framework. Consequently, scientists researching viral pathogens from different taxonomic groups might reconsider their allegiance to these canons as the basis for expectation, explanation, or prediction. Future efforts could benefit from consistent definitions, and from developing frameworks that are compatible with the evidence and apply to particular biological and ecological contexts.

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来源期刊
Virus Evolution
Virus Evolution Immunology and Microbiology-Microbiology
CiteScore
10.50
自引率
5.70%
发文量
108
审稿时长
14 weeks
期刊介绍: Virus Evolution is a new Open Access journal focusing on the long-term evolution of viruses, viruses as a model system for studying evolutionary processes, viral molecular epidemiology and environmental virology. The aim of the journal is to provide a forum for original research papers, reviews, commentaries and a venue for in-depth discussion on the topics relevant to virus evolution.
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