通过孟德尔随机化确定心肌梗死的潜在药物靶点。

IF 2.6 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
PLoS ONE Pub Date : 2024-12-23 eCollection Date: 2024-01-01 DOI:10.1371/journal.pone.0313770
Xiangyou Yu, Shasha Liu
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引用次数: 0

摘要

背景:本研究探讨血浆和脑脊液(CSF)蛋白与心肌梗死(MI)风险之间的关系。确定特定的蛋白质作为心肌梗死的生物标志物可以增强我们对疾病机制的理解,并为临床实践提供信息。方法:我们将血浆和脑脊液蛋白的蛋白质数量性状位点(pQTL)数据与心肌梗死的全基因组关联研究(GWAS)汇总统计相结合。采用孟德尔随机化(MR)分析建立因果关系,并采用贝叶斯共定位和Spearman相关分析。对于血浆蛋白,我们使用Cheng等人的pQTL数据选择了与734种蛋白相关的738个顺式作用snp。采用“TwoSampleMR”方法和反方差加权MR进行评价。结果:在血浆中,CD8A和HDHD2被确定为心肌梗死的保护因素,而DPEP1与心肌梗死风险增加有关。在脑脊液中,CD30配体与心肌梗死风险相关。贝叶斯共定位支持血浆中CD8A的关联。血浆和脑脊液结果之间未发现显著相关性,提示这些生物标志物的作用机制不同。结论:我们的研究确定了几种与心肌梗死风险相关的血浆和脑脊液蛋白,为该疾病的生物学基础提供了新的见解。这些发现可以指导未来心肌梗死生物标志物的研究,并有助于改善预防和治疗策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Identifying potential drug targets for myocardial infarction through Mendelian randomization.

Identifying potential drug targets for myocardial infarction through Mendelian randomization.

Identifying potential drug targets for myocardial infarction through Mendelian randomization.

Identifying potential drug targets for myocardial infarction through Mendelian randomization.

Background: This study explored the associations between plasma and cerebrospinal fluid (CSF) proteins and myocardial infarction (MI) risk. Identifying specific proteins as biomarkers for MI could enhance our understanding of disease mechanisms and inform clinical practice.

Methods: We combined protein quantitative trait loci (pQTL) data for plasma and CSF proteins with genome-wide association study (GWAS) summary statistics for MI. Mendelian Randomization (MR) analyses were conducted to establish causal relationships, supported by Bayesian colocalization and Spearman correlation analyses. For plasma proteins, we used pQTL data from Cheng et al. to select 738 cis-acting SNPs associated with 734 proteins. The "TwoSampleMR" method and inverse-variance weighted MR were applied for evaluations.

Results: In plasma, CD8A and HDHD2 were identified as protective factors against MI, while DPEP1 was linked to increased risk. In CSF, CD30 Ligand was associated with MI risk. Bayesian colocalization supported the association for CD8A in plasma. No significant correlation was found between plasma and CSF results, suggesting distinct mechanisms for these biomarkers.

Conclusion: Our study identified several plasma and CSF proteins linked to MI risk, offering new insights into the disease's biological underpinnings. These findings could guide future research on MI biomarkers and contribute to improved prevention and treatment strategies.

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来源期刊
PLoS ONE
PLoS ONE 生物-生物学
CiteScore
6.20
自引率
5.40%
发文量
14242
审稿时长
3.7 months
期刊介绍: PLOS ONE is an international, peer-reviewed, open-access, online publication. PLOS ONE welcomes reports on primary research from any scientific discipline. It provides: * Open-access—freely accessible online, authors retain copyright * Fast publication times * Peer review by expert, practicing researchers * Post-publication tools to indicate quality and impact * Community-based dialogue on articles * Worldwide media coverage
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