{"title":"rpm-1的功能丧失不会增强rpm-1突变体的表型。","authors":"Yue Sun, Daniela Gaio, Bokun Xie, Kentaro Noma, Zilu Wu, Yishi Jin","doi":"10.17912/micropub.biology.001396","DOIUrl":null,"url":null,"abstract":"<p><p>The <i>C. elegans</i> E3 ubiquitin ligase RPM-1 consists of 3,766 amino acids, with a RING finger domain at the C-terminus that functions to target the DLK-1 kinase for degradation for synapse development and axon termination. <i>rpms-1 (</i> for <i>rpm-1 short,</i> aka F07B7.12 <i>)</i> resides 35 kb away from <i>rpm-1</i> on chromosome V, and is a near-perfect 12 kb duplication of <i>rpm-1 ,</i> including the entire promoter region and coding sequences. RPMS-1 consists of 1,964 amino acids and is identical to the N-terminal half of RPM-1 , except the last 40 amino acids. Previous studies showed that transgenic overexpression of the duplicated region of <i>rpm-1 (+)</i> did not rescue synapse defects of <i>rpm-1</i> loss of function mutants. Here, using CRISPR editing, we generated a double knockout of <i>rpm-1</i> and <i>rpms-1</i> . We find that axon and synapse defects in <i>rpm-1rpms-1</i> double mutants resemble those in <i>rpm-1</i> single mutants. Expression levels of endogenously tagged DLK-1 protein are increased to a comparable degree in <i>rpm-1</i> and <i>rpm-1rpms-1</i> mutants, compared to the control. These data, along with previous transgene expression analysis, support the idea that <i>rpms-1</i> does not have a major role in RPM-1-mediated cellular processes.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2024 ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11659880/pdf/","citationCount":"0","resultStr":"{\"title\":\"Loss of function in <i>rpms-1</i> does not enhance phenotypes of <i>rpm-1</i> mutants.\",\"authors\":\"Yue Sun, Daniela Gaio, Bokun Xie, Kentaro Noma, Zilu Wu, Yishi Jin\",\"doi\":\"10.17912/micropub.biology.001396\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The <i>C. elegans</i> E3 ubiquitin ligase RPM-1 consists of 3,766 amino acids, with a RING finger domain at the C-terminus that functions to target the DLK-1 kinase for degradation for synapse development and axon termination. <i>rpms-1 (</i> for <i>rpm-1 short,</i> aka F07B7.12 <i>)</i> resides 35 kb away from <i>rpm-1</i> on chromosome V, and is a near-perfect 12 kb duplication of <i>rpm-1 ,</i> including the entire promoter region and coding sequences. RPMS-1 consists of 1,964 amino acids and is identical to the N-terminal half of RPM-1 , except the last 40 amino acids. Previous studies showed that transgenic overexpression of the duplicated region of <i>rpm-1 (+)</i> did not rescue synapse defects of <i>rpm-1</i> loss of function mutants. Here, using CRISPR editing, we generated a double knockout of <i>rpm-1</i> and <i>rpms-1</i> . We find that axon and synapse defects in <i>rpm-1rpms-1</i> double mutants resemble those in <i>rpm-1</i> single mutants. Expression levels of endogenously tagged DLK-1 protein are increased to a comparable degree in <i>rpm-1</i> and <i>rpm-1rpms-1</i> mutants, compared to the control. These data, along with previous transgene expression analysis, support the idea that <i>rpms-1</i> does not have a major role in RPM-1-mediated cellular processes.</p>\",\"PeriodicalId\":74192,\"journal\":{\"name\":\"microPublication biology\",\"volume\":\"2024 \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-12-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11659880/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"microPublication biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.17912/micropub.biology.001396\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"microPublication biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.17912/micropub.biology.001396","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
Loss of function in rpms-1 does not enhance phenotypes of rpm-1 mutants.
The C. elegans E3 ubiquitin ligase RPM-1 consists of 3,766 amino acids, with a RING finger domain at the C-terminus that functions to target the DLK-1 kinase for degradation for synapse development and axon termination. rpms-1 ( for rpm-1 short, aka F07B7.12 ) resides 35 kb away from rpm-1 on chromosome V, and is a near-perfect 12 kb duplication of rpm-1 , including the entire promoter region and coding sequences. RPMS-1 consists of 1,964 amino acids and is identical to the N-terminal half of RPM-1 , except the last 40 amino acids. Previous studies showed that transgenic overexpression of the duplicated region of rpm-1 (+) did not rescue synapse defects of rpm-1 loss of function mutants. Here, using CRISPR editing, we generated a double knockout of rpm-1 and rpms-1 . We find that axon and synapse defects in rpm-1rpms-1 double mutants resemble those in rpm-1 single mutants. Expression levels of endogenously tagged DLK-1 protein are increased to a comparable degree in rpm-1 and rpm-1rpms-1 mutants, compared to the control. These data, along with previous transgene expression analysis, support the idea that rpms-1 does not have a major role in RPM-1-mediated cellular processes.