肉汤微量稀释法测定嗜肺军团菌对临床相关抗菌素的敏感性。

IF 1.7 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS
Max Sewell , Caitlin Farley , Edward A.R. Portal , Diane Lindsay , Maria Luisa Ricci , Sophie Jarraud , Maria Scaturro , Ghislaine Descours , Anne Vatland Krøvel , Rachael Barton , Ian Boostom , Roisin Ure , Darja Kese , Valeria Gaia , Matej Golob , Susanne Paukner , Christophe Ginevra , Baharak Afshar , Sendurann Nadarajah , Ingrid Wybo , Abdelrahim Zoued
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引用次数: 0

摘要

目前尚无国际商定的详细方案来评估嗜肺军团菌的抗菌药物敏感性试验(AST)(需要建立流行病学临界值或“ECOFF”边界);因此,这些分离株的抗菌素耐药性无法确定。正如一份国际撰写的意见文件所指出的那样,利用含有活性炭作为成分的培养基来促进军团菌生长的AST方法是不可靠的,需要一个新的金标准。在这里,我们定义了一种详细的肉汤微稀释(BMD)方案,使用确定的细胞培养收集沉积的对照菌株(Philadelphia-1和Knoxville-1)以及两种可访问的参考菌株,它们具有中度(携带lpeab)和显著(携带23S rRNA突变)升高的阿奇霉素最低抑制浓度(MIC)。定义的方案使多达8个嗜肺乳杆菌菌株能够在单个96孔板上设置每个抗微生物药物测试。在37 °C的摇培养箱中培养48 小时后,使用临床相关抗菌剂阿奇霉素(0.01-0.25 mg/L)、左氧氟沙星(0.008-0.03 mg/L)、利福霉素(0.01-2 mg/L)、利福平(0.0002-0.0008 mg/L)和多西环素(0.25-16 mg/L)常规捕获这些参考菌株MIC的初始范围已经过经验确定。制定这一国际商定的议定书为下一步奠定了基础:验证和比较国际军团菌参考实验室之间的抗菌素范围,以确定这些临床相关抗菌素的推定耐药截止阈值。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Broth microdilution protocol for determining antimicrobial susceptibility of Legionella pneumophila to clinically relevant antimicrobials
Currently there is no detailed, internationally agreed protocol defined to evaluate antimicrobial susceptibility testing (AST) for Legionella pneumophila (required to establish epidemiological cut-off value or “ECOFF” boundaries); therefore, antimicrobial resistance in these isolates cannot be defined. AST methods utilising media containing activated charcoal as an ingredient, to enable Legionella growth, are unreliable as noted in an internationally authored opinion paper and a new gold standard is required. Here we define a detailed protocol for broth microdilution (BMD) using defined cell culture collection-deposited control reference strains (Philadelphia-1 and Knoxville-1) as well as two accessible reference strains with moderately (lpeAB-carrying) and markedly (23S rRNA mutation-carrying) elevated azithromycin minimum inhibitory concentration (MIC). The defined protocol enables up to eight L. pneumophila strains to be set up on a single 96-well plate per antimicrobial tested. Initial ranges to routinely capture an MIC for these reference strains using clinically relevant antimicrobials azithromycin (0.01–0.25 mg/L), levofloxacin (0.008–0.03 mg/L), lefamulin (0.01–2 mg/L), rifampicin (0.0002–0.0008 mg/L) and doxycycline (0.25–16 mg/L) following incubation for 48 h at 37 °C in a shaking incubator have been empirically determined. Establishment of this internationally agreed protocol sets the scene for the next step: validation and comparison of antimicrobial ranges between international Legionella reference laboratories to establish putative resistance cut-off thresholds for these clinically relevant antimicrobials.
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来源期刊
Journal of microbiological methods
Journal of microbiological methods 生物-生化研究方法
CiteScore
4.30
自引率
4.50%
发文量
151
审稿时长
29 days
期刊介绍: The Journal of Microbiological Methods publishes scholarly and original articles, notes and review articles. These articles must include novel and/or state-of-the-art methods, or significant improvements to existing methods. Novel and innovative applications of current methods that are validated and useful will also be published. JMM strives for scholarship, innovation and excellence. This demands scientific rigour, the best available methods and technologies, correctly replicated experiments/tests, the inclusion of proper controls, calibrations, and the correct statistical analysis. The presentation of the data must support the interpretation of the method/approach. All aspects of microbiology are covered, except virology. These include agricultural microbiology, applied and environmental microbiology, bioassays, bioinformatics, biotechnology, biochemical microbiology, clinical microbiology, diagnostics, food monitoring and quality control microbiology, microbial genetics and genomics, geomicrobiology, microbiome methods regardless of habitat, high through-put sequencing methods and analysis, microbial pathogenesis and host responses, metabolomics, metagenomics, metaproteomics, microbial ecology and diversity, microbial physiology, microbial ultra-structure, microscopic and imaging methods, molecular microbiology, mycology, novel mathematical microbiology and modelling, parasitology, plant-microbe interactions, protein markers/profiles, proteomics, pyrosequencing, public health microbiology, radioisotopes applied to microbiology, robotics applied to microbiological methods,rumen microbiology, microbiological methods for space missions and extreme environments, sampling methods and samplers, soil and sediment microbiology, transcriptomics, veterinary microbiology, sero-diagnostics and typing/identification.
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