利用微生物实验室自动化系统培养4小时后捕获的数字图像,指导阳性血液培养的继代培养。

IF 6.1 2区 医学 Q1 MICROBIOLOGY
Journal of Clinical Microbiology Pub Date : 2025-02-19 Epub Date: 2024-12-20 DOI:10.1128/jcm.01320-24
Melvilí Cintrón, Brenden Clark, Edwin Miranda, N Esther Babady
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引用次数: 0

摘要

传统上,细菌在固体培养基上生长的初步检查[例如,鉴定(ID)和/或抗菌药物敏感性试验(AST)]发生在血液培养阳性(BC)继代培养后16-24小时。早期的ID和AST可以通过审查使用微生物实验室自动化(MLA)系统捕获的数字图像来促进。本研究的目的是评估在WASPLab MLA系统上拍摄的4小时图像对快速细菌鉴定和AST的效用。对2021年1月1日至2022年7月31日期间所有阳性bc结果进行回顾性审查。提取WASPLab App数据以确定从4小时图像做出的决定(例如,执行ID和/或AST或重新孵育板)。培养结果从实验室信息系统(LIS)中提取。在研究期间,共有6845例bc呈阳性。回顾了1476个培养物(21.6%)的4小时图像:1200个培养物因生长不足而重新孵育,276个培养物(4.0%)被送去进行ID和/或AST。质谱鉴定的ID与分子BC鉴定面板的结果100%一致。4小时和隔夜生长的AST结果之间的总体分类一致性为98%。其余5369例(78.4%)的4小时图像无法在白班期间进行审查。实现MLA上bc的早期读取时间允许快速和准确的ID和AST结果。然而,优化阅读计划以配合实验室的操作计划是充分发挥早期阅读时间潜力的关键。重要性:近年来,越来越多的临床微生物实验室采用实验室自动化处理和培养提交细菌培养的标本。在我们的机构,我们在2018年对所有培养实施了Copan WASPLab,包括阳性血液培养。考虑到阳性血液培养开始于较高的生物生物量,第一次图像捕获是在培养4小时后进行的。在这项研究中,我们通过捕捉和计算基于图像上识别的生长所采取的有效措施的百分比,以及MALDI-TOF MS和有效准确的抗菌药物敏感性试验(AST)结果的新鉴定的产量,来研究这张早期4小时图像的效用。我们发现,虽然4小时时间点提供了准确、早期的识别和AST结果,但总体产量很低。从实际的角度来看,这个回顾促使我们停止对这个时间点的获取和回顾。虽然我们的人员配置模式可能是造成这种低产量的原因,但我们希望我们的经验能帮助其他实验室决定如何实施阳性血培养的WASPLab工作流程。因此,我们相信JCM的读者会对这些信息感兴趣。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Utility of digital images captured after 4 h of incubation on a microbiology laboratory automation system in guiding the work-up of subcultures from positive blood cultures.

Initial workup [e.g., identification (ID) and/or antimicrobial susceptibility testing (AST)] of bacterial growth on solid media traditionally occurs 16-24 h after sub-culturing of positive blood cultures (BC). Early ID and AST can be facilitated by reviewing digital images captured using a Microbiology Laboratory Automation (MLA) system. The goal of this study was to evaluate the utility of images captured at 4 h on the WASPLab MLA system for rapid bacterial ID and AST. Retrospective review of all positive BCs results between 1 January 2021 and 31 July 2022 was performed. WASPLab App data were extracted to determine the decision (e.g., perform ID and/or AST or re-incubate plates) made from the 4 h image. Culture results were extracted from the laboratory information system (LIS). A total of 6,845 BCs flagged positive during the study period. The 4 h images for 1,476 cultures (21.6%) were reviewed: 1,200 cultures were re-incubated due to insufficient growth and 276 cultures (4.0%) were sent for ID and/or AST. ID by mass spectrometry was in 100% agreement with that of the molecular BC identification panels. Overall categorical agreement between AST results from the 4 h and overnight growth was 98%. The 4 h images for the remaining 5,369 cultures (78.4%) were not available for review during the day shift. Implementing early reading times for BCs on MLA allows for rapid and accurate ID and AST results. However, optimization of the reading schedule to align with the laboratory's operation schedule is key to realizing the full potential of early reading times.

Importance: In recent years, an increasing number of clinical microbiology laboratories have adopted laboratory automation for processing and incubation of specimens submitted for bacterial culture. At our institution, we implemented the Copan WASPLab in 2018 for all cultures, including positive blood cultures. Given that positive blood cultures start with a higher biomass of organisms, the first image capture was set up to occur after 4 h of incubation. In this study, we investigated the utility of this early 4 h image by capturing and calculating the percentage of useful actions taken based on growth identified on the image and the yield of both new identification by MALDI-TOF MS and valid and accurate antimicrobial susceptibility testing (AST) results. We found that while the 4-hour time point provided accurate, early identification and AST results, the overall yield was minimal. From a practical standpoint, this review prompted us to discontinue capture and review of this time point. While our staffing model is likely responsible for this low yield, we hope that our experience would help other laboratories decide how to implement WASPLab workflow for positive blood cultures. Thus, we believe that this information will be of interest to the readers of JCM.

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来源期刊
Journal of Clinical Microbiology
Journal of Clinical Microbiology 医学-微生物学
CiteScore
17.10
自引率
4.30%
发文量
347
审稿时长
3 months
期刊介绍: The Journal of Clinical Microbiology® disseminates the latest research concerning the laboratory diagnosis of human and animal infections, along with the laboratory's role in epidemiology and the management of infectious diseases.
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