Tatjana Popović Milovanović, Shannon Greer, Renata Iličić, Aleksandra Jelušić, Daisy Bown, Mikaeel Hussain, Jamie Harrison, Murray Grant, Joana G Vicente, David J Studholme
{"title":"61株油菜黄单胞菌基因组序列数据。来自塞尔维亚芸苔属作物的campestris。","authors":"Tatjana Popović Milovanović, Shannon Greer, Renata Iličić, Aleksandra Jelušić, Daisy Bown, Mikaeel Hussain, Jamie Harrison, Murray Grant, Joana G Vicente, David J Studholme","doi":"10.1099/acmi.0.000870.v3","DOIUrl":null,"url":null,"abstract":"<p><p>This Technical Resource describes genome sequencing data for 61 isolates of the bacterial pathogen <i>Xanthomonas campestris</i> pv. <i>campestris</i> collected from <i>Brassica</i> and <i>Raphanus</i> crops between 2010 and 2021 in Serbia. We present the raw sequencing reads and annotated contig-level genome assemblies and determine the races of ten isolates. The data can be used to test hypotheses and phylogeographic analyses and inform the design of informative molecular markers for population genetics studies. When combined with phenotypic data, they could be used to dissect relationships between genotypes and phenotypes such as host range and virulence. Finally, these genome sequences expand our inventory of plasmids known to reside in this pathogen.</p>","PeriodicalId":94366,"journal":{"name":"Access microbiology","volume":"6 11","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11653112/pdf/","citationCount":"0","resultStr":"{\"title\":\"Genome sequence data for 61 isolates of Xanthomonas campestris pv. campestris from Brassica crops in Serbia.\",\"authors\":\"Tatjana Popović Milovanović, Shannon Greer, Renata Iličić, Aleksandra Jelušić, Daisy Bown, Mikaeel Hussain, Jamie Harrison, Murray Grant, Joana G Vicente, David J Studholme\",\"doi\":\"10.1099/acmi.0.000870.v3\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>This Technical Resource describes genome sequencing data for 61 isolates of the bacterial pathogen <i>Xanthomonas campestris</i> pv. <i>campestris</i> collected from <i>Brassica</i> and <i>Raphanus</i> crops between 2010 and 2021 in Serbia. We present the raw sequencing reads and annotated contig-level genome assemblies and determine the races of ten isolates. The data can be used to test hypotheses and phylogeographic analyses and inform the design of informative molecular markers for population genetics studies. When combined with phenotypic data, they could be used to dissect relationships between genotypes and phenotypes such as host range and virulence. Finally, these genome sequences expand our inventory of plasmids known to reside in this pathogen.</p>\",\"PeriodicalId\":94366,\"journal\":{\"name\":\"Access microbiology\",\"volume\":\"6 11\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-11-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11653112/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Access microbiology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1099/acmi.0.000870.v3\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Access microbiology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1099/acmi.0.000870.v3","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
Genome sequence data for 61 isolates of Xanthomonas campestris pv. campestris from Brassica crops in Serbia.
This Technical Resource describes genome sequencing data for 61 isolates of the bacterial pathogen Xanthomonas campestris pv. campestris collected from Brassica and Raphanus crops between 2010 and 2021 in Serbia. We present the raw sequencing reads and annotated contig-level genome assemblies and determine the races of ten isolates. The data can be used to test hypotheses and phylogeographic analyses and inform the design of informative molecular markers for population genetics studies. When combined with phenotypic data, they could be used to dissect relationships between genotypes and phenotypes such as host range and virulence. Finally, these genome sequences expand our inventory of plasmids known to reside in this pathogen.
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