Mark Dinhobl, Edward Spinard, Hillary Birtlery, Nicolas Tesler, Charles Masembe, Paolo Ribeca, Manuel V Borca, Douglas P Gladue
{"title":"非洲猪瘟病毒生物型鉴定工具。","authors":"Mark Dinhobl, Edward Spinard, Hillary Birtlery, Nicolas Tesler, Charles Masembe, Paolo Ribeca, Manuel V Borca, Douglas P Gladue","doi":"10.1128/mra.00530-24","DOIUrl":null,"url":null,"abstract":"<p><p>African swine fever virus biotyping is a recently described classification technique that is based on an isolate's encoded proteome. In short, proteomes are compared and grouped based on unsupervised machine learning. This tool analyzes African swine fever virus (ASFV) genomes and will report their closest matches along with their ASFV biotypes. Here, we describe a standalone implementation that can be freely downloaded and used.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":" ","pages":"e0053024"},"PeriodicalIF":0.7000,"publicationDate":"2024-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"African swine fever virus biotype identification tool.\",\"authors\":\"Mark Dinhobl, Edward Spinard, Hillary Birtlery, Nicolas Tesler, Charles Masembe, Paolo Ribeca, Manuel V Borca, Douglas P Gladue\",\"doi\":\"10.1128/mra.00530-24\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>African swine fever virus biotyping is a recently described classification technique that is based on an isolate's encoded proteome. In short, proteomes are compared and grouped based on unsupervised machine learning. This tool analyzes African swine fever virus (ASFV) genomes and will report their closest matches along with their ASFV biotypes. Here, we describe a standalone implementation that can be freely downloaded and used.</p>\",\"PeriodicalId\":18654,\"journal\":{\"name\":\"Microbiology Resource Announcements\",\"volume\":\" \",\"pages\":\"e0053024\"},\"PeriodicalIF\":0.7000,\"publicationDate\":\"2024-12-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Microbiology Resource Announcements\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1128/mra.00530-24\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Microbiology Resource Announcements","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1128/mra.00530-24","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
African swine fever virus biotyping is a recently described classification technique that is based on an isolate's encoded proteome. In short, proteomes are compared and grouped based on unsupervised machine learning. This tool analyzes African swine fever virus (ASFV) genomes and will report their closest matches along with their ASFV biotypes. Here, we describe a standalone implementation that can be freely downloaded and used.
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