{"title":"一种从印度生姜中分离的产纤维素酶的黑色酵母样真菌。","authors":"Rameshwar Avchar, Srushti Shinde, Yaminee Kashid, Parang Gangani, Avinash Sharma","doi":"10.1099/ijsem.0.006614","DOIUrl":null,"url":null,"abstract":"<p><p>The genus <i>Exophiala</i>, known for its melanized, yeast-like appearance, includes a diverse group of fungi with significant implications across various fields. An isolate representing a novel species was identified within this genus from a ginger tuber from India, based on morphological characteristics and molecular phylogenetic analysis. Phylogenetic analysis of the D1/D2 domain of the 26S LSU rRNA gene, SSU rRNA gene and the internal transcribed spacer (ITS) region confirmed this strain as a new species. It was named <i>Exophiala zingiberis</i> sp. nov. (MycoBank no. MB 855415), with MCC 9960<sup>T</sup> designated as the holotype and PYCC 9834 as the isotype. <i>Exophiala zingiberis</i> was positioned as a sister species to a clade that includes <i>Exophiala castellanii</i>, <i>Exophiala mali</i> and three additional species. Phylogenetic analysis indicates that while <i>E. zingiberis</i> shares a common ancestor with these species, it is genetically distinct, underscoring its novel status. The type strain of this novel species differs from <i>Exophiala yuxiensis</i> YMF1.07354<sup>T</sup>, the most closely related species, by 19 nucleotide substitutions (3.6% sequence variation) in the D1/D2 region (549 bp compared) and 104 nucleotide substitutions and 44 gaps (27.1% sequence variation) in the ITS region (546 bp compared).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"74 12","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Exophiala zingiberis</i> sp. nov., a novel cellulase-producing black yeast-like fungi isolated from ginger in India.\",\"authors\":\"Rameshwar Avchar, Srushti Shinde, Yaminee Kashid, Parang Gangani, Avinash Sharma\",\"doi\":\"10.1099/ijsem.0.006614\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The genus <i>Exophiala</i>, known for its melanized, yeast-like appearance, includes a diverse group of fungi with significant implications across various fields. An isolate representing a novel species was identified within this genus from a ginger tuber from India, based on morphological characteristics and molecular phylogenetic analysis. Phylogenetic analysis of the D1/D2 domain of the 26S LSU rRNA gene, SSU rRNA gene and the internal transcribed spacer (ITS) region confirmed this strain as a new species. It was named <i>Exophiala zingiberis</i> sp. nov. (MycoBank no. MB 855415), with MCC 9960<sup>T</sup> designated as the holotype and PYCC 9834 as the isotype. <i>Exophiala zingiberis</i> was positioned as a sister species to a clade that includes <i>Exophiala castellanii</i>, <i>Exophiala mali</i> and three additional species. Phylogenetic analysis indicates that while <i>E. zingiberis</i> shares a common ancestor with these species, it is genetically distinct, underscoring its novel status. The type strain of this novel species differs from <i>Exophiala yuxiensis</i> YMF1.07354<sup>T</sup>, the most closely related species, by 19 nucleotide substitutions (3.6% sequence variation) in the D1/D2 region (549 bp compared) and 104 nucleotide substitutions and 44 gaps (27.1% sequence variation) in the ITS region (546 bp compared).</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"74 12\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2024-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006614\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006614","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Exophiala zingiberis sp. nov., a novel cellulase-producing black yeast-like fungi isolated from ginger in India.
The genus Exophiala, known for its melanized, yeast-like appearance, includes a diverse group of fungi with significant implications across various fields. An isolate representing a novel species was identified within this genus from a ginger tuber from India, based on morphological characteristics and molecular phylogenetic analysis. Phylogenetic analysis of the D1/D2 domain of the 26S LSU rRNA gene, SSU rRNA gene and the internal transcribed spacer (ITS) region confirmed this strain as a new species. It was named Exophiala zingiberis sp. nov. (MycoBank no. MB 855415), with MCC 9960T designated as the holotype and PYCC 9834 as the isotype. Exophiala zingiberis was positioned as a sister species to a clade that includes Exophiala castellanii, Exophiala mali and three additional species. Phylogenetic analysis indicates that while E. zingiberis shares a common ancestor with these species, it is genetically distinct, underscoring its novel status. The type strain of this novel species differs from Exophiala yuxiensis YMF1.07354T, the most closely related species, by 19 nucleotide substitutions (3.6% sequence variation) in the D1/D2 region (549 bp compared) and 104 nucleotide substitutions and 44 gaps (27.1% sequence variation) in the ITS region (546 bp compared).
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.