{"title":"蛋白质组学在妇科癌症中发现生物标志物:系统综述。","authors":"Dong-Hui Huang, Yi-Zi Li, He-Li Xu, Fang-Hua Liu, Xiao-Ying Li, Qian Xiao, Xing Chen, Ke-Xin Liu, Dong-Dong Wang, Yi-Xuan Men, Yi-Ning Cao, Song Gao, Yu-Hong Zhao, Ting-Ting Gong, Qi-Jun Wu","doi":"10.1021/acs.jproteome.4c00675","DOIUrl":null,"url":null,"abstract":"<p><p>The present study aims to summarize the current biomarker landscape in gynecological cancers (GCs) and incorporate bioinformatics analysis to highlight specific biological processes. The literature was retrieved from PubMed, Web of Science, Embase, Scopus, Ovid Medline, and Cochrane Library. The final search was conducted on December 7, 2022. Prospective registration was completed with the PROSPERO with registration number CRD42023477145. This systematic review covered proteomic research on biomarkers for cervical, endometrial, and ovarian cancers. The PANTHER classification system was used to classify the shortlisted candidate biomarkers (CBs), and the STRING database was utilized to visualize protein-protein interaction networks. A total of 23 articles were included in this systematic review. Consistently regulated CBs in the GCs include collagen alpha-2(I) chain, collagen alpha-1(III) chain, collagen alpha-2(V) chain, calreticulin, protein disulfide-isomerase A3, heat shock protein family A (Hsp70) member 5, prolyl 4-hydroxylase, beta polypeptide, fibrinogen alpha chain, fibrinogen gamma chain, apolipoprotein B-100, apolipoprotein C-IV, and apolipoprotein M. In conclusion, collagens, fibrinogens, chaperones, and apolipoproteins were revealed to be replicated in GCs and to be regulated consistently. These CBs contribute to GC etiology and physiology by participating in collagen fibril organization, blood coagulation, protein folding in endoplasmic reticulum, and lipid transporter activity.</p>","PeriodicalId":48,"journal":{"name":"Journal of Proteome Research","volume":" ","pages":"1-12"},"PeriodicalIF":3.6000,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Proteomics for Biomarker Discovery in Gynecological Cancers: A Systematic Review.\",\"authors\":\"Dong-Hui Huang, Yi-Zi Li, He-Li Xu, Fang-Hua Liu, Xiao-Ying Li, Qian Xiao, Xing Chen, Ke-Xin Liu, Dong-Dong Wang, Yi-Xuan Men, Yi-Ning Cao, Song Gao, Yu-Hong Zhao, Ting-Ting Gong, Qi-Jun Wu\",\"doi\":\"10.1021/acs.jproteome.4c00675\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The present study aims to summarize the current biomarker landscape in gynecological cancers (GCs) and incorporate bioinformatics analysis to highlight specific biological processes. 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In conclusion, collagens, fibrinogens, chaperones, and apolipoproteins were revealed to be replicated in GCs and to be regulated consistently. 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引用次数: 0
摘要
本研究旨在总结目前妇科癌症(GCs)的生物标志物景观,并结合生物信息学分析来突出特定的生物学过程。文献检索自PubMed、Web of Science、Embase、Scopus、Ovid Medline和Cochrane Library。最后一次搜寻于2022年12月7日进行。前瞻性注册使用PROSPERO完成,注册号为CRD42023477145。本系统综述涵盖了宫颈癌、子宫内膜癌和卵巢癌生物标志物的蛋白质组学研究。使用PANTHER分类系统对入围候选生物标志物(CBs)进行分类,并使用STRING数据库对蛋白质-蛋白质相互作用网络进行可视化。本系统综述共纳入23篇文章。在GCs中一致调节的CBs包括胶原α -2(I)链、胶原α -1(III)链、胶原α -2(V)链、钙网蛋白、蛋白二硫异构酶A3、热休克蛋白家族A (Hsp70)成员5、脯氨酰4-羟化酶、β多肽、纤维蛋白原α链、纤维蛋白原γ链、载脂蛋白B-100、载脂蛋白C-IV和载脂蛋白m。载脂蛋白在GCs中被复制,并受到一致的调节。这些CBs通过参与胶原纤维组织、血液凝固、内质网蛋白折叠和脂质转运蛋白活性,参与GC的病因学和生理学。
Proteomics for Biomarker Discovery in Gynecological Cancers: A Systematic Review.
The present study aims to summarize the current biomarker landscape in gynecological cancers (GCs) and incorporate bioinformatics analysis to highlight specific biological processes. The literature was retrieved from PubMed, Web of Science, Embase, Scopus, Ovid Medline, and Cochrane Library. The final search was conducted on December 7, 2022. Prospective registration was completed with the PROSPERO with registration number CRD42023477145. This systematic review covered proteomic research on biomarkers for cervical, endometrial, and ovarian cancers. The PANTHER classification system was used to classify the shortlisted candidate biomarkers (CBs), and the STRING database was utilized to visualize protein-protein interaction networks. A total of 23 articles were included in this systematic review. Consistently regulated CBs in the GCs include collagen alpha-2(I) chain, collagen alpha-1(III) chain, collagen alpha-2(V) chain, calreticulin, protein disulfide-isomerase A3, heat shock protein family A (Hsp70) member 5, prolyl 4-hydroxylase, beta polypeptide, fibrinogen alpha chain, fibrinogen gamma chain, apolipoprotein B-100, apolipoprotein C-IV, and apolipoprotein M. In conclusion, collagens, fibrinogens, chaperones, and apolipoproteins were revealed to be replicated in GCs and to be regulated consistently. These CBs contribute to GC etiology and physiology by participating in collagen fibril organization, blood coagulation, protein folding in endoplasmic reticulum, and lipid transporter activity.
期刊介绍:
Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".