{"title":"Accurate attenuation characterization in optical coherence tomography using multi-reference phantoms and deep learning.","authors":"Nian Peng, Chengli Xu, Yi Shen, Wu Yuan, Xiaoyu Yang, Changhai Qi, Haixia Qiu, Ying Gu, Defu Chen","doi":"10.1364/BOE.543606","DOIUrl":null,"url":null,"abstract":"<p><p>The optical attenuation coefficient (AC), a crucial tissue parameter indicating the rate of light attenuation within a medium, enables quantitative analysis of tissue properties and facilitates tissue differentiation. Despite its growing clinical significance, accurate quantification of AC from optical coherence tomography (OCT) signals remains a pressing concern. This study comprehensively investigates the factors influencing the accuracy of quantitative AC extraction among existing OCT-based AC extraction algorithms. Subsequently, we propose an approach, the Multi-Reference Phantom Driven Network (MR-Net), which leverages multi-reference phantoms and deep learning to implicitly model factors affecting OCT signal propagation, thereby automatically regressing AC. Using a dataset from Intralipid and silicone-TiO<sub>2</sub> phantoms with known AC values obtained from a collimated transmission system and imaged with a 1300 nm swept-source OCT system, we conducted a thorough comparison focusing on data length, out-of-focus distance, and reference phantoms' attenuation among existing OCT-based AC extraction algorithms. By leveraging this extensive dataset, MR-Net can automatically model the complex physical effects in the transmission process of OCT signals, significantly enhancing the accuracy of AC predictions. MR-Net outperforms other algorithms in all metrics, achieving an average relative error of only 10.43% for calculating attenuation samples, significantly lower than the lowest value of 23.72% achieved by other algorithms. This method offers a quantitative framework for disease diagnosis, ultimately contributing to more accurate and effective tissue characterization in clinical settings.</p>","PeriodicalId":8969,"journal":{"name":"Biomedical optics express","volume":"15 12","pages":"6697-6714"},"PeriodicalIF":2.9000,"publicationDate":"2024-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11640581/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical optics express","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1364/BOE.543606","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/12/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
摘要
光衰减系数(AC)是表示介质中光衰减速度的重要组织参数,可对组织特性进行定量分析,并有助于组织分化。尽管其临床意义日益重要,但从光学相干断层扫描(OCT)信号中准确量化衰减系数仍是一个亟待解决的问题。本研究全面研究了现有基于 OCT 的 AC 提取算法中影响定量 AC 提取准确性的因素。随后,我们提出了一种方法--多参考模型驱动网络(MR-Net),它利用多参考模型和深度学习对影响 OCT 信号传播的因素进行隐式建模,从而自动回归交流。利用从准直透射系统获得的已知AC值的Intralipid和硅-二氧化钛模型数据集,并使用1300 nm扫描源OCT系统进行成像,我们对现有基于OCT的AC提取算法进行了全面比较,重点关注数据长度、焦外距离和参考模型衰减。通过利用这一广泛的数据集,MR-Net 可以自动模拟 OCT 信号传输过程中的复杂物理效应,从而显著提高交流预测的准确性。MR-Net 在所有指标上都优于其他算法,计算衰减样本的平均相对误差仅为 10.43%,明显低于其他算法的最低值 23.72%。该方法为疾病诊断提供了一个定量框架,最终有助于在临床环境中更准确、更有效地描述组织特征。
Accurate attenuation characterization in optical coherence tomography using multi-reference phantoms and deep learning.
The optical attenuation coefficient (AC), a crucial tissue parameter indicating the rate of light attenuation within a medium, enables quantitative analysis of tissue properties and facilitates tissue differentiation. Despite its growing clinical significance, accurate quantification of AC from optical coherence tomography (OCT) signals remains a pressing concern. This study comprehensively investigates the factors influencing the accuracy of quantitative AC extraction among existing OCT-based AC extraction algorithms. Subsequently, we propose an approach, the Multi-Reference Phantom Driven Network (MR-Net), which leverages multi-reference phantoms and deep learning to implicitly model factors affecting OCT signal propagation, thereby automatically regressing AC. Using a dataset from Intralipid and silicone-TiO2 phantoms with known AC values obtained from a collimated transmission system and imaged with a 1300 nm swept-source OCT system, we conducted a thorough comparison focusing on data length, out-of-focus distance, and reference phantoms' attenuation among existing OCT-based AC extraction algorithms. By leveraging this extensive dataset, MR-Net can automatically model the complex physical effects in the transmission process of OCT signals, significantly enhancing the accuracy of AC predictions. MR-Net outperforms other algorithms in all metrics, achieving an average relative error of only 10.43% for calculating attenuation samples, significantly lower than the lowest value of 23.72% achieved by other algorithms. This method offers a quantitative framework for disease diagnosis, ultimately contributing to more accurate and effective tissue characterization in clinical settings.
期刊介绍:
The journal''s scope encompasses fundamental research, technology development, biomedical studies and clinical applications. BOEx focuses on the leading edge topics in the field, including:
Tissue optics and spectroscopy
Novel microscopies
Optical coherence tomography
Diffuse and fluorescence tomography
Photoacoustic and multimodal imaging
Molecular imaging and therapies
Nanophotonic biosensing
Optical biophysics/photobiology
Microfluidic optical devices
Vision research.