{"title":"北京2018-2022年人类鼻病毒基因型多样性高流行率的多中心回顾性流行病学研究","authors":"Qing Wang, Qi Huang, Qin Luo, Xiaofeng Wei, Xue Wang, Maozhong Li, Cheng Gong, Fang Huang","doi":"10.3967/bes2024.126","DOIUrl":null,"url":null,"abstract":"<p><strong>Objective: </strong>To comprehensively examine the molecular epidemiological characteristics of human rhinovirus (HRV) in Beijing.</p><p><strong>Methods: </strong>A total of 7,151 children and adults with acute respiratory tract infections (ARTIs) were recruited from 35 sentinel hospitals in Beijing between 2018 and 2022. Their respiratory samples were obtained, and epidemiological and clinical data were collected. Nucleic acid testing for 11 respiratory pathogens, including HRV, was performed on the specimens. We sequenced VP4/VP2 or 5'UTR of HRV isolates to identify their genotypes using phylogenetic analyses.</p><p><strong>Results: </strong>HRV was detected in 462 (6.5%) cases. A total of 105 HRV genotypes were successfully identified in 359 (77.7%) specimens, comprising 247 (68.8%) with HRV-A, 42 (11.7%) with HRV-B, and 70 (19.5%) with HRV-C. No predominant genotype was observed. HRV was prevalent year-round with two weak peaks in spring and autumn. HRV detection declined gradually between 2018 and 2022, with seven genotypes disappearing and five genotypes emerging. HRV detection rate decreased by age without resurge among old people. HRV-C was more common among children aged less than 5 years with severe community-acquired pneumonia compared to HRV-A and HRV-B. Adults infected with HRV-B had higher rates of hospitalization, intensive care unit admission, and complications than those infected with HRV-A and HRV-C.</p><p><strong>Conclusion: </strong>HRV epidemics in Beijing were highly dispersed in genotypes, which probably resulted in a high prevalence of HRV infection, attenuated its seasonality, and made it more difficult to establish effective population immunity.</p>","PeriodicalId":93903,"journal":{"name":"Biomedical and environmental sciences : BES","volume":"37 11","pages":"1262-1272"},"PeriodicalIF":0.0000,"publicationDate":"2024-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"High Diversity in Genotypes of Human Rhinovirus Contributes to High Prevalence in Beijing, 2018-2022: A Retrospective Multiple-Center Epidemiological Study.\",\"authors\":\"Qing Wang, Qi Huang, Qin Luo, Xiaofeng Wei, Xue Wang, Maozhong Li, Cheng Gong, Fang Huang\",\"doi\":\"10.3967/bes2024.126\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Objective: </strong>To comprehensively examine the molecular epidemiological characteristics of human rhinovirus (HRV) in Beijing.</p><p><strong>Methods: </strong>A total of 7,151 children and adults with acute respiratory tract infections (ARTIs) were recruited from 35 sentinel hospitals in Beijing between 2018 and 2022. Their respiratory samples were obtained, and epidemiological and clinical data were collected. Nucleic acid testing for 11 respiratory pathogens, including HRV, was performed on the specimens. We sequenced VP4/VP2 or 5'UTR of HRV isolates to identify their genotypes using phylogenetic analyses.</p><p><strong>Results: </strong>HRV was detected in 462 (6.5%) cases. A total of 105 HRV genotypes were successfully identified in 359 (77.7%) specimens, comprising 247 (68.8%) with HRV-A, 42 (11.7%) with HRV-B, and 70 (19.5%) with HRV-C. No predominant genotype was observed. HRV was prevalent year-round with two weak peaks in spring and autumn. HRV detection declined gradually between 2018 and 2022, with seven genotypes disappearing and five genotypes emerging. HRV detection rate decreased by age without resurge among old people. HRV-C was more common among children aged less than 5 years with severe community-acquired pneumonia compared to HRV-A and HRV-B. Adults infected with HRV-B had higher rates of hospitalization, intensive care unit admission, and complications than those infected with HRV-A and HRV-C.</p><p><strong>Conclusion: </strong>HRV epidemics in Beijing were highly dispersed in genotypes, which probably resulted in a high prevalence of HRV infection, attenuated its seasonality, and made it more difficult to establish effective population immunity.</p>\",\"PeriodicalId\":93903,\"journal\":{\"name\":\"Biomedical and environmental sciences : BES\",\"volume\":\"37 11\",\"pages\":\"1262-1272\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-11-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biomedical and environmental sciences : BES\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3967/bes2024.126\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical and environmental sciences : BES","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3967/bes2024.126","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
目的:全面了解北京地区人鼻病毒(HRV)的分子流行病学特征。方法:2018年至2022年,从北京35家哨点医院招募7151名急性呼吸道感染(ARTIs)儿童和成人。采集呼吸道样本,收集流行病学和临床资料。对标本进行了包括HRV在内的11种呼吸道病原体的核酸检测。我们对HRV分离株的VP4/VP2或5'UTR序列进行测序,通过系统发育分析确定其基因型。结果:检出HRV 462例(6.5%)。在359例(77.7%)标本中共鉴定出105种HRV基因型,其中HRV-A 247例(68.8%),HRV- b 42例(11.7%),HRV- c 70例(19.5%)。未观察到显性基因型。HRV全年流行,春季和秋季有两个弱高峰。2018年至2022年,HRV检出率逐渐下降,7个基因型消失,5个基因型出现。老年人HRV检出率随年龄下降而无回升。与HRV-A和HRV-B相比,HRV-C在患有严重社区获得性肺炎的5岁以下儿童中更为常见。感染HRV-B的成年人比感染HRV-A和HRV-C的成年人有更高的住院率、重症监护病房住院率和并发症发生率。结论:北京地区HRV流行在基因型上高度分散,这可能导致HRV感染流行率高,季节性减弱,难以建立有效的人群免疫。
High Diversity in Genotypes of Human Rhinovirus Contributes to High Prevalence in Beijing, 2018-2022: A Retrospective Multiple-Center Epidemiological Study.
Objective: To comprehensively examine the molecular epidemiological characteristics of human rhinovirus (HRV) in Beijing.
Methods: A total of 7,151 children and adults with acute respiratory tract infections (ARTIs) were recruited from 35 sentinel hospitals in Beijing between 2018 and 2022. Their respiratory samples were obtained, and epidemiological and clinical data were collected. Nucleic acid testing for 11 respiratory pathogens, including HRV, was performed on the specimens. We sequenced VP4/VP2 or 5'UTR of HRV isolates to identify their genotypes using phylogenetic analyses.
Results: HRV was detected in 462 (6.5%) cases. A total of 105 HRV genotypes were successfully identified in 359 (77.7%) specimens, comprising 247 (68.8%) with HRV-A, 42 (11.7%) with HRV-B, and 70 (19.5%) with HRV-C. No predominant genotype was observed. HRV was prevalent year-round with two weak peaks in spring and autumn. HRV detection declined gradually between 2018 and 2022, with seven genotypes disappearing and five genotypes emerging. HRV detection rate decreased by age without resurge among old people. HRV-C was more common among children aged less than 5 years with severe community-acquired pneumonia compared to HRV-A and HRV-B. Adults infected with HRV-B had higher rates of hospitalization, intensive care unit admission, and complications than those infected with HRV-A and HRV-C.
Conclusion: HRV epidemics in Beijing were highly dispersed in genotypes, which probably resulted in a high prevalence of HRV infection, attenuated its seasonality, and made it more difficult to establish effective population immunity.