预测肺腺癌高危患者:浆细胞相关基因的力量。

IF 2.5 3区 医学 Q3 ONCOLOGY
Oncology Pub Date : 2024-12-11 DOI:10.1159/000543101
Jiameng Gao, Xianqiang Zhou, Weibin Tian, Junyi Xia, Lei Wang, Yao Shen
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引用次数: 0

摘要

背景:肺癌在世界范围内的发病率仍然很高,并且仍然是全球癌症相关死亡的主要原因。造成这种情况的主要原因是绝大多数患者只有在疾病进展到晚期或转移时才被诊断出来。因此,肺癌的早期诊断至关重要。约85%的肺癌为非小细胞肺癌(NSCLC),肺腺癌作为非小细胞肺癌(NSCLC)的一种,更容易发生远处转移,预后较差。它通常主要用免疫疗法治疗。目前,免疫治疗主要集中在T细胞上,但随着研究的深入,长期以来被认为在抗肿瘤反应中非必需的浆细胞越来越被认识到其关键作用。方法:本研究整合了TCGA、Tumor Immune Single-cell Hub 2和10X数据库的数据,重点关注浆细胞。通过聚类分析和LASSO回归分析,建立LUAD高危患者的预测模型,进一步探讨风险模型与免疫细胞的关系,为患者免疫治疗的疗效提供可能的预测。此外,我们还进行了药物敏感性分析和免疫检查点分析,以确定对高危患者临床管理有潜在益处的药物。同时,我们进行了进一步的免疫检查点分析,以确定LUAD的潜在治疗靶点。结果:我们整合TCGA、Tumor Immune Single-cell Hub 2和10X数据库,通过聚类分析和LASSO回归分析,以浆细胞为研究对象,建立了涉及BEX5、CASP10、EPSTI1、LY9四个特征基因的LUAD高危患者预测模型。ROC和结果表明,我们的模型具有较强的预测性能。此外,我们发现风险模型与免疫细胞密切相关,为预测患者免疫治疗的疗效提供了可能。随后,我们进行了药物敏感性分析和免疫检查点分析,发现大多数药物对低风险患者更敏感,而ABT-888、AS601245和CCT007093可能对高危患者有更大的潜在临床获益。免疫检查点分析显示,在高危和低危患者组中,ADORA2A、BTLA、CD276、CD27、CD28、CD40LG、CD48和TNFRSF14的表达存在显著差异,提示它们有可能成为LUAD的治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Predicting High-Risk Patients with Lung Adenocarcinoma: The Power of Plasma Cell-Related Genes.

Introduction: The incidence of lung cancer remains high worldwide and is still the leading cause of cancer-related deaths globally. The primary reason for this is that the vast majority of patients are diagnosed only when the disease has progressed to an advanced stage or metastasized. Therefore, early diagnosis of lung cancer is crucial. Approximately 85% of lung cancers are non-small cell lung cancer (NSCLC). As a type of NSCLC, lung adenocarcinoma (LUAD) is more prone to distant metastasis and has a poorer prognosis. It is often primarily treated with immunotherapy. Currently, immunotherapy mainly focuses on T cells. However, with the deepening of research, plasma cells, which have long been considered non-essential in anti-tumor responses, have been increasingly recognized for their critical role.

Methods: This study integrates data from TCGA, Tumor Immune Single-Cell Hub 2 (TISCH), and 10X databases, focusing on plasma cells. Through clustering analysis and Least Absolute Shrinkage and Selection Operator (LASSO) regression analysis, it aimed to establish a predictive model for high-risk LUAD patients and further explore the relationship between the risk model and immune cells, with the goal of providing potential predictions for the efficacy of immunotherapy for patients. Additionally, we conducted drug sensitivity analysis and immune checkpoint analysis to identify drugs with potential benefits for the clinical management of high-risk patients. At the same time, we performed further immune checkpoint analysis to identify potential therapeutic targets for LUAD.

Results: By integrating the TCGA, TISCH, and 10X databases and focusing on plasma cells through clustering analysis and LASSO regression analysis, we established a predictive model for high-risk LUAD patients involving four feature genes: BEX5, CASP10, EPSTI1, and LY9. The ROC and results demonstrate that our model has strong predictive performance. Additionally, we found that the risk model is closely related to immune cells, providing the potential for predicting the efficacy of immunotherapy for patients. Subsequently, we conducted drug sensitivity analysis and immune checkpoint analysis, revealing that the majority of drugs are more sensitive to low-risk patients, while ABT-888, AS601245, and CCT007093 may have greater potential clinical benefits for high-risk patients. Immune checkpoint analysis showed significant differences in the expression of ADORA2A, BTLA, CD276, CD27, CD28, CD40LG, CD48, and TNFRSF14 between high-risk and low-risk patient groups, suggesting their potential as therapeutic targets for LUAD.

Conclusion: We constructed a risk assessment model for LUAD patients based on these genes. This model achieved breakthroughs in predicting the prognosis of LUAD patients with different risk levels and identifying potential immune targets, which were validated in the TCGA-LUAD clinical samples.

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来源期刊
Oncology
Oncology 医学-肿瘤学
CiteScore
6.00
自引率
2.90%
发文量
76
审稿时长
6-12 weeks
期刊介绍: Although laboratory and clinical cancer research need to be closely linked, observations at the basic level often remain removed from medical applications. This journal works to accelerate the translation of experimental results into the clinic, and back again into the laboratory for further investigation. The fundamental purpose of this effort is to advance clinically-relevant knowledge of cancer, and improve the outcome of prevention, diagnosis and treatment of malignant disease. The journal publishes significant clinical studies from cancer programs around the world, along with important translational laboratory findings, mini-reviews (invited and submitted) and in-depth discussions of evolving and controversial topics in the oncology arena. A unique feature of the journal is a new section which focuses on rapid peer-review and subsequent publication of short reports of phase 1 and phase 2 clinical cancer trials, with a goal of insuring that high-quality clinical cancer research quickly enters the public domain, regardless of the trial’s ultimate conclusions regarding efficacy or toxicity.
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