药用植物茜草（茜草科）叶绿体全基因组序列及系统发育分析。

IF 0.5 4区生物学 Q4 GENETICS & HEREDITY

Mitochondrial DNA. Part B, Resources Pub Date : 2024-12-08 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2438281

Thu Thao Thi Huynh, Minh Trong Quang, Hoang Danh Nguyen

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引用次数: 0

摘要

在越南的传统医药中，有广泛的应用，具有观赏和药用价值。本研究收集并鉴定了棘球蚴（Oxyceros horridus）第一叶绿体，全长155,333 bp， GC含量为37.5%。该基因组包含130个注释基因（包括85个蛋白质编码基因，37个tRNA基因和8个rRNA基因），呈现出与其他Rubiaceae家族成员一致的典型四部结构。系统发育分析结果表明，水蛭属Ixoroideae亚科，与瑞士Fosergia shweliensis和tenophylla栀子ia有亲缘关系。该研究丰富了茜草科cp基因组数据和系统发育的认识。

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Complete chloroplast genome sequence of the medicinal plant Oxyceros horridus (Rubiaceae) and phylogenetic analysis.

Oxyceros horridus Lour. 1790, valued for ornamental and medicinal properties, has been extensively utilized in traditional medicinal in Vietnam. This study assembled and characterized the first chloroplast of Oxyceros horridus, consisted of 155,333 bp with a GC content of 37.5%. The genome included 130 annotated genes (including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes), exhibited a typical quadripartite structure consistent with those found in other members of the Rubiaceae family. Phylogenetic analysis placed O. horridus in Ixoroideae subfamily, closely related to Fosergia shweliensis and Gardenia tenophylla. This study enriches cp genome data and phylogenetic insights within Rubiaceae.

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来源期刊

Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology

CiteScore

1.30

自引率

20.00%

发文量

670

期刊介绍： This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.