Li-Hsin Cheng, Xiaowu Sun, Charlie Elliot, Robin Condliffe, David G Kiely, Samer Alabed, Andrew J Swift, Rob J van der Geest
{"title":"用可解释的多视点心脏MR系列深度学习模型预测平均肺动脉压。","authors":"Li-Hsin Cheng, Xiaowu Sun, Charlie Elliot, Robin Condliffe, David G Kiely, Samer Alabed, Andrew J Swift, Rob J van der Geest","doi":"10.1016/j.jocmr.2024.101133","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Pulmonary hypertension (PH) is a heterogeneous condition and regardless of etiology impacts negatively on survival. Diagnosis of PH is based on hemodynamic parameters measured invasively at right heart catheterization (RHC); however, a non-invasive alternative would be clinically valuable. Our aim was to estimate RHC parameters non-invasively from cardiac magnetic resonance (MR) data using deep learning models and to identify key contributing imaging features.</p><p><strong>Methods: </strong>We constructed an explainable convolutional neural network (CNN) taking cardiac MR cine series from four different views as input to predict mean pulmonary artery pressure (mPAP). The model was trained and evaluated on 1646 examinations. The model's attention weight and predictive performance associated with each frame, view, or phase were used to judge its importance. Additionally, the importance of each cardiac chamber was inferred by perturbing part of the input pixels.</p><p><strong>Results: </strong>The model achieved a Pearson correlation coefficient of 0.80 and R<sup>2</sup> of 0.64 in predicting mPAP and identified the right ventricle region on short-axis view to be especially informative.</p><p><strong>Conclusion: </strong>Hemodynamic parameters can be estimated non-invasively with a CNN, using MR cine series from four views, revealing key contributing features at the same time.</p>","PeriodicalId":15221,"journal":{"name":"Journal of Cardiovascular Magnetic Resonance","volume":" ","pages":"101133"},"PeriodicalIF":4.2000,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Mean pulmonary artery pressure prediction with explainable multi-view cardiovascular magnetic resonance cine series deep learning model.\",\"authors\":\"Li-Hsin Cheng, Xiaowu Sun, Charlie Elliot, Robin Condliffe, David G Kiely, Samer Alabed, Andrew J Swift, Rob J van der Geest\",\"doi\":\"10.1016/j.jocmr.2024.101133\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Pulmonary hypertension (PH) is a heterogeneous condition and regardless of etiology impacts negatively on survival. Diagnosis of PH is based on hemodynamic parameters measured invasively at right heart catheterization (RHC); however, a non-invasive alternative would be clinically valuable. Our aim was to estimate RHC parameters non-invasively from cardiac magnetic resonance (MR) data using deep learning models and to identify key contributing imaging features.</p><p><strong>Methods: </strong>We constructed an explainable convolutional neural network (CNN) taking cardiac MR cine series from four different views as input to predict mean pulmonary artery pressure (mPAP). The model was trained and evaluated on 1646 examinations. The model's attention weight and predictive performance associated with each frame, view, or phase were used to judge its importance. Additionally, the importance of each cardiac chamber was inferred by perturbing part of the input pixels.</p><p><strong>Results: </strong>The model achieved a Pearson correlation coefficient of 0.80 and R<sup>2</sup> of 0.64 in predicting mPAP and identified the right ventricle region on short-axis view to be especially informative.</p><p><strong>Conclusion: </strong>Hemodynamic parameters can be estimated non-invasively with a CNN, using MR cine series from four views, revealing key contributing features at the same time.</p>\",\"PeriodicalId\":15221,\"journal\":{\"name\":\"Journal of Cardiovascular Magnetic Resonance\",\"volume\":\" \",\"pages\":\"101133\"},\"PeriodicalIF\":4.2000,\"publicationDate\":\"2024-12-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Cardiovascular Magnetic Resonance\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1016/j.jocmr.2024.101133\",\"RegionNum\":1,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CARDIAC & CARDIOVASCULAR SYSTEMS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Cardiovascular Magnetic Resonance","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1016/j.jocmr.2024.101133","RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CARDIAC & CARDIOVASCULAR SYSTEMS","Score":null,"Total":0}
Mean pulmonary artery pressure prediction with explainable multi-view cardiovascular magnetic resonance cine series deep learning model.
Background: Pulmonary hypertension (PH) is a heterogeneous condition and regardless of etiology impacts negatively on survival. Diagnosis of PH is based on hemodynamic parameters measured invasively at right heart catheterization (RHC); however, a non-invasive alternative would be clinically valuable. Our aim was to estimate RHC parameters non-invasively from cardiac magnetic resonance (MR) data using deep learning models and to identify key contributing imaging features.
Methods: We constructed an explainable convolutional neural network (CNN) taking cardiac MR cine series from four different views as input to predict mean pulmonary artery pressure (mPAP). The model was trained and evaluated on 1646 examinations. The model's attention weight and predictive performance associated with each frame, view, or phase were used to judge its importance. Additionally, the importance of each cardiac chamber was inferred by perturbing part of the input pixels.
Results: The model achieved a Pearson correlation coefficient of 0.80 and R2 of 0.64 in predicting mPAP and identified the right ventricle region on short-axis view to be especially informative.
Conclusion: Hemodynamic parameters can be estimated non-invasively with a CNN, using MR cine series from four views, revealing key contributing features at the same time.
期刊介绍:
Journal of Cardiovascular Magnetic Resonance (JCMR) publishes high-quality articles on all aspects of basic, translational and clinical research on the design, development, manufacture, and evaluation of cardiovascular magnetic resonance (CMR) methods applied to the cardiovascular system. Topical areas include, but are not limited to:
New applications of magnetic resonance to improve the diagnostic strategies, risk stratification, characterization and management of diseases affecting the cardiovascular system.
New methods to enhance or accelerate image acquisition and data analysis.
Results of multicenter, or larger single-center studies that provide insight into the utility of CMR.
Basic biological perceptions derived by CMR methods.