用耦合团簇理论精确计算纳米级多孔有机笼CC3的气体结合。

IF 2.8 4区 材料科学 Q3 MATERIALS SCIENCE, MULTIDISCIPLINARY
Ka Un Lao
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引用次数: 0

摘要

本研究研究了七种气体分子——n2、CH4、C2H2、CO2、H2O、SF6和chcl3——在纳米级多孔有机笼CC3的中心腔内的结合,使用了高水平局部耦合簇方法,该方法考虑了单、双和微扰三重激励,外推到完整的基集极限。这导致了CC3@7数据集的形成,由于需要准确描述约束效应和有助于结合的多体相互作用,该数据集提出了独特的挑战。CC3@7数据集用于评估各种低成本的计算方法。在预测7种气体分子结合顺序的方法中,推荐基于MP2的方法是MP2+aiD(CCD),平均绝对误差(MAE)为0.4 kcal/mol。对于密度泛函理论(DFT)方法,推荐使用B97M-V+EABC、B97M-V、M06-L-D3、B97M-rV+EABC、PBE0+D4和PBE+D4, MAEs范围为0.3 ~ 0.4 kcal/mol。此外,r2SCAN-3c和ωB97X- 3c被认为是低成本的选择,MAEs约为1 kcal/mol。考虑到精度和稳定性,在只有DFT方法可行的情况下,PBE0+D4被推荐用于研究纳米尺度的主客绑定。此外,PBE0+D4已成功应用于研究附加原子和受阻溶剂分子的结合,证明了CC3笼的灵活性,可以容纳超过其空腔尺寸的大分子。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Accurate computation of gas binding in the nanoscale porous organic cage CC3 via coupled cluster theory.

This study investigates the binding of seven gas molecules-N2, CH4, C2H2, CO2, H2O, SF6, and CHCl3-within the central cavity of the nanoscale porous organic cage CC3, using a high-level local coupled cluster method that accounts for single, double, and perturbative triple excitations, extrapolated to the complete basis set limit. This results in the formation of the CC3@7 dataset, which presents unique challenges due to the need for accurate descriptions of confinement effects and many-body interactions that contribute to binding. The CC3@7 dataset is used to evaluate a variety of lower-cost computational approaches. Among the methods tested for accurately predicting the binding order for all seven gas molecules, the recommended MP2-based approach is MP2+aiD(CCD), which achieves a mean absolute error (MAE) of 0.4 kcal mol-1. For density functional theory (DFT) methods, B97M-V+EABC, B97M-V, M06-L-D3, B97M-rV+EABC, PBE0+D4, and PBE+D4 are recommended, with MAEs ranging from 0.3 to 0.4 kcal mol-1. Additionally, r2SCAN-3c andωB97X-3c are identified as low-cost options, with MAEs of approximately 1 kcal mol-1. Considering both accuracy and stability, PBE0+D4 is recommended for investigating nanoscale host-guest bindings when only DFT methods are feasible. Furthermore, PBE0+D4 has been successfully applied to study the binding of additional atoms and hindered solvent molecules, demonstrating the flexibility of the CC3 cage to accommodate larger molecules that exceed its cavity size.

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来源期刊
Nanotechnology
Nanotechnology 工程技术-材料科学:综合
CiteScore
7.10
自引率
5.70%
发文量
820
审稿时长
2.5 months
期刊介绍: The journal aims to publish papers at the forefront of nanoscale science and technology and especially those of an interdisciplinary nature. Here, nanotechnology is taken to include the ability to individually address, control, and modify structures, materials and devices with nanometre precision, and the synthesis of such structures into systems of micro- and macroscopic dimensions such as MEMS based devices. It encompasses the understanding of the fundamental physics, chemistry, biology and technology of nanometre-scale objects and how such objects can be used in the areas of computation, sensors, nanostructured materials and nano-biotechnology.
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