老年败血症患者脂质代谢相关生物标志物的鉴定和预后分析。

IF 1.4 4区 医学 Q4 INFECTIOUS DISEASES
Yeping Bian, Jian Xu, Xiaojing Deng, Suming Zhou, Jiayi Tong
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引用次数: 0

摘要

本研究旨在发现老年脓毒症患者的脂质代谢相关生物标志物。方法:从基因表达综合数据库中检索老年脓毒症患者标本的基因表达谱。通过“limma”R包获得差异表达基因,通过“WGCNA”R包筛选与老年脓毒症患者高度相关的模块和基因。该研究还包括使用基因本体和京都基因与基因组百科全书进行富集分析,以及分析蛋白质-蛋白质相互作用网络。采用受试者工作特征曲线确定枢纽基因的诊断价值。结果:从1317个差异表达基因、8335个模块基因和1045个脂质代谢相关基因中,共保留了73个差异表达脂质代谢相关基因(DELRGs)。基因本体和京都基因与基因组百科结果显示,DELRGs主要与脂质代谢有关。我们从DELRGs蛋白-蛋白相互作用网络中鉴定出10个枢纽基因。受试者操作特征验证结果表明,7个枢纽基因(PPARG、ACSL1、IRS2、PLA2G4A、ALOX5、SPTLC1和JAK2)可作为老年脓毒症患者的生物标志物。预后图显示,这7个中心基因可以用来评估死亡风险。结论:我们筛选了7个具有诊断价值的脂质代谢相关中枢基因。作为潜在的生物标志物和治疗靶点,这些分子可能对老年患者脓毒症的进展产生关键影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification of lipid metabolism-related biomarkers and prognostic analysis in geriatric patients with sepsis.

Introduction: This study aimed to find the lipid metabolism-associated biomarkers in geriatric patients with sepsis.

Methodology: The gene expression profiles of specimens from geriatric patients with sepsis were retrieved from the Gene Expression Omnibus database. Differentially expressed genes were obtained via "limma" R package, and modules and genes highly associated with geriatric patients with sepsis were screened via "WGCNA" R package. The study also involved conducting enrichment analyses using Gene Ontology and Kyoto Encyclopedia of Genes and Genomes, as well as analyzing protein-protein interaction networks. The receiver operating characteristic curves were employed to determine the diagnostic values of hub genes.

Results: A total of 73 differentially expressed lipid metabolism-related genes (DELRGs) were retained from the 1,317 differentially expressed genes, 8,335 module genes, and 1,045 lipid metabolism-related genes. The Gene Ontology and Kyoto Encyclopedia of Genes and Genomes results showed that DELRGs were mostly related to lipid metabolism. We identified ten hub genes from the protein-protein interaction network of DELRGs. The result of receiver operating characteristic validation indicated that seven hub genes (PPARG, ACSL1, IRS2, PLA2G4A, ALOX5, SPTLC1, and JAK2) worked as the biomarkers of geriatric patients with sepsis. The prognostic nomogram suggested that the set of seven hub genes can be utilized to evaluate the mortality risk.

Conclusions: We screened seven lipid metabolism-related hub genes with diagnostic values. These molecules may exert a pivotal influence on the progression of sepsis in geriatric patients, as potential biomarkers and therapeutic targets.

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来源期刊
CiteScore
3.70
自引率
5.30%
发文量
239
审稿时长
4-8 weeks
期刊介绍: The Journal of Infection in Developing Countries (JIDC) is an international journal, intended for the publication of scientific articles from Developing Countries by scientists from Developing Countries. JIDC is an independent, on-line publication with an international editorial board. JIDC is open access with no cost to view or download articles and reasonable cost for publication of research artcles, making JIDC easily availiable to scientists from resource restricted regions.
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