创伤后应激障碍基因表达谱在前瞻性社区队列中的分析。

4区 生物学 Q2 Medicine
Jan Dahrendorff, Agaz Wani, Thomas Keller, Don Armstrong, Annie Qu, Derek E Wildman, Maria Carmen Valero, Karestan C Koenen, Allison E Aiello, Monica Uddin
{"title":"创伤后应激障碍基因表达谱在前瞻性社区队列中的分析。","authors":"Jan Dahrendorff, Agaz Wani, Thomas Keller, Don Armstrong, Annie Qu, Derek E Wildman, Maria Carmen Valero, Karestan C Koenen, Allison E Aiello, Monica Uddin","doi":"10.1353/hub.2017.a935047","DOIUrl":null,"url":null,"abstract":"<p><p>Post-traumatic stress disorder (PTSD) is a common and debilitating psychiatric disorder that may occur in individuals exposed to traumatic events such as accidents, interpersonal violence, war, combat, or natural disasters. Additionally, PTSD has been implicated in the development of a variety of chronic conditions including cardiovascular and metabolic diseases, suggesting that the biological alterations associated with the disorder can manifest themselves as chronic diseases in those suffering from PTSD. The biological underpinnings of the disorder are not well understood. Gene expression studies can illuminate the complex physiology of PTSD reflecting the embodiment of trauma, i.e., the process in which traumatic experiences in our social environments could potentially be manifested in our body by genomic mechanisms. To date, gene expression studies that examine the whole transcriptome are scarce and limited to single-timepoint assessments. Here we applied a transcriptome-wide gene expression screen with RNA-sequencing to whole blood samples from predominantly African-American participants in a community-dwelling setting to elucidate the gene expression signatures associated with the development of PTSD. The study participants (N=72, of whom 21 eventually developed PTSD) are a trauma-exposed subsample of participants enrolled in a longitudinal and prospective cohort study of adults living in Detroit, Michigan. PTSD was assessed in a structured telephone interview and whole blood samples were taken both before and after trauma exposure. We found 45 differentially expressed genes associated with PTSD development with an estimated log2 fold change > 1.5 at a nominal p-value (pPAX6, TSPAN7, PXDN, VWC2, SULF1, and NFATC4 were also ubiquitously expressed in all brain regions. Longitudinal sampling provides a promising mean to elucidate the pathophysiology underlying the embodiment of trauma.</p>","PeriodicalId":13053,"journal":{"name":"Human Biology","volume":"95 1","pages":"33-47"},"PeriodicalIF":0.0000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11606054/pdf/","citationCount":"0","resultStr":"{\"title\":\"Analysis of Posttraumatic Stress Disorder Gene Expression Profiles in a Prospective, Community-Based Cohort.\",\"authors\":\"Jan Dahrendorff, Agaz Wani, Thomas Keller, Don Armstrong, Annie Qu, Derek E Wildman, Maria Carmen Valero, Karestan C Koenen, Allison E Aiello, Monica Uddin\",\"doi\":\"10.1353/hub.2017.a935047\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Post-traumatic stress disorder (PTSD) is a common and debilitating psychiatric disorder that may occur in individuals exposed to traumatic events such as accidents, interpersonal violence, war, combat, or natural disasters. Additionally, PTSD has been implicated in the development of a variety of chronic conditions including cardiovascular and metabolic diseases, suggesting that the biological alterations associated with the disorder can manifest themselves as chronic diseases in those suffering from PTSD. The biological underpinnings of the disorder are not well understood. Gene expression studies can illuminate the complex physiology of PTSD reflecting the embodiment of trauma, i.e., the process in which traumatic experiences in our social environments could potentially be manifested in our body by genomic mechanisms. To date, gene expression studies that examine the whole transcriptome are scarce and limited to single-timepoint assessments. Here we applied a transcriptome-wide gene expression screen with RNA-sequencing to whole blood samples from predominantly African-American participants in a community-dwelling setting to elucidate the gene expression signatures associated with the development of PTSD. The study participants (N=72, of whom 21 eventually developed PTSD) are a trauma-exposed subsample of participants enrolled in a longitudinal and prospective cohort study of adults living in Detroit, Michigan. PTSD was assessed in a structured telephone interview and whole blood samples were taken both before and after trauma exposure. We found 45 differentially expressed genes associated with PTSD development with an estimated log2 fold change > 1.5 at a nominal p-value (pPAX6, TSPAN7, PXDN, VWC2, SULF1, and NFATC4 were also ubiquitously expressed in all brain regions. Longitudinal sampling provides a promising mean to elucidate the pathophysiology underlying the embodiment of trauma.</p>\",\"PeriodicalId\":13053,\"journal\":{\"name\":\"Human Biology\",\"volume\":\"95 1\",\"pages\":\"33-47\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11606054/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Human Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1353/hub.2017.a935047\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"Medicine\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Human Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1353/hub.2017.a935047","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"Medicine","Score":null,"Total":0}
引用次数: 0

摘要

创伤后应激障碍(PTSD)是一种常见的使人衰弱的精神障碍,可能发生在暴露于创伤性事件的个体中,如事故、人际暴力、战争、战斗或自然灾害。此外,PTSD与包括心血管和代谢疾病在内的多种慢性疾病的发展有关,这表明与该疾病相关的生物学改变可以在PTSD患者中表现为慢性疾病。这种疾病的生物学基础尚不清楚。基因表达研究可以阐明PTSD的复杂生理学,反映创伤的具体化,即我们社会环境中的创伤经历可能通过基因组机制在我们体内表现出来的过程。迄今为止,检查整个转录组的基因表达研究很少,并且仅限于单个时间点评估。在这里,我们应用转录组基因表达筛选和rna测序对社区居住环境中主要是非裔美国人参与者的全血样本进行分析,以阐明与PTSD发展相关的基因表达特征。研究参与者(N=72,其中21人最终发展为创伤后应激障碍)是在密歇根州底特律市的一项纵向和前瞻性队列研究中登记的创伤暴露亚样本。创伤后应激障碍是通过结构化的电话访谈来评估的,在创伤暴露前后都采集了全血样本。我们发现45个与PTSD发展相关的差异表达基因(pPAX6, TSPAN7, PXDN, VWC2, SULF1和NFATC4在所有脑区也普遍表达),在名义p值下估计有log2倍的变化。纵向抽样提供了一个有希望的手段来阐明病理生理学背后的体现创伤。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Analysis of Posttraumatic Stress Disorder Gene Expression Profiles in a Prospective, Community-Based Cohort.

Post-traumatic stress disorder (PTSD) is a common and debilitating psychiatric disorder that may occur in individuals exposed to traumatic events such as accidents, interpersonal violence, war, combat, or natural disasters. Additionally, PTSD has been implicated in the development of a variety of chronic conditions including cardiovascular and metabolic diseases, suggesting that the biological alterations associated with the disorder can manifest themselves as chronic diseases in those suffering from PTSD. The biological underpinnings of the disorder are not well understood. Gene expression studies can illuminate the complex physiology of PTSD reflecting the embodiment of trauma, i.e., the process in which traumatic experiences in our social environments could potentially be manifested in our body by genomic mechanisms. To date, gene expression studies that examine the whole transcriptome are scarce and limited to single-timepoint assessments. Here we applied a transcriptome-wide gene expression screen with RNA-sequencing to whole blood samples from predominantly African-American participants in a community-dwelling setting to elucidate the gene expression signatures associated with the development of PTSD. The study participants (N=72, of whom 21 eventually developed PTSD) are a trauma-exposed subsample of participants enrolled in a longitudinal and prospective cohort study of adults living in Detroit, Michigan. PTSD was assessed in a structured telephone interview and whole blood samples were taken both before and after trauma exposure. We found 45 differentially expressed genes associated with PTSD development with an estimated log2 fold change > 1.5 at a nominal p-value (pPAX6, TSPAN7, PXDN, VWC2, SULF1, and NFATC4 were also ubiquitously expressed in all brain regions. Longitudinal sampling provides a promising mean to elucidate the pathophysiology underlying the embodiment of trauma.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Human Biology
Human Biology 生物-生物学
CiteScore
1.90
自引率
0.00%
发文量
88
审稿时长
>12 weeks
期刊介绍: Human Biology publishes original scientific articles, brief communications, letters to the editor, and review articles on the general topic of biological anthropology. Our main focus is understanding human biological variation and human evolution through a broad range of approaches. We encourage investigators to submit any study on human biological diversity presented from an evolutionary or adaptive perspective. Priority will be given to interdisciplinary studies that seek to better explain the interaction between cultural processes and biological processes in our evolution. Methodological papers are also encouraged. Any computational approach intended to summarize cultural variation is encouraged. Studies that are essentially descriptive or concern only a limited geographic area are acceptable only when they have a wider relevance to understanding human biological variation. Manuscripts may cover any of the following disciplines, once the anthropological focus is apparent: human population genetics, evolutionary and genetic demography, quantitative genetics, evolutionary biology, ancient DNA studies, biological diversity interpreted in terms of adaptation (biometry, physical anthropology), and interdisciplinary research linking biological and cultural diversity (inferred from linguistic variability, ethnological diversity, archaeological evidence, etc.).
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信