Pinar Avci, Marie C Düsedau, Víctor Padrón-Laso, Zan Jonke, Ramona Fenderle, Florian Neumeier, Ikenna U Ikeliani
{"title":"机器学习辅助离体共聚焦激光扫描显微镜检测基底细胞癌。","authors":"Pinar Avci, Marie C Düsedau, Víctor Padrón-Laso, Zan Jonke, Ramona Fenderle, Florian Neumeier, Ikenna U Ikeliani","doi":"10.1111/ijd.17519","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Ex vivo confocal laser scanning microscopy (EVCM) is an emerging imaging modality that enables near real-time histology of whole tissue samples. However, the adoption of EVCM into clinical routine is partly limited because the recognition of modality-specific diagnostic features requires specialized training. Therefore, we aimed to build a machine learning algorithm for the detection of basal cell carcinoma (BCC) in images acquired using EVCM and, in turn, facilitate the examiner's decision-making process.</p><p><strong>Methods: </strong>In this proof-of-concept study, histologically confirmed BCC fresh tissue samples were used to generate 50 EVCM images to train and assess a convolutional neural network architecture (MobileNet-V1) via tenfold cross-validation.</p><p><strong>Results: </strong>Overall sensitivity and specificity of the model for detecting BCC and tumor-free regions on EVCM images compared to expert evaluation were 0.88 and 0.85, respectively. We constructed receiver operator characteristic and precision-recall curves from the aggregated tenfold cross-validation to assess the model's performance; the area under the curve was 0.94 and 0.87, respectively. Subsequently, the performance of one of the selected machine learning models was assessed with 19 new EVCM images of tumor-containing (n = 10) and 9 tumor-free (n = 9) skin tissue. A sensitivity of 0.83 and a specificity of 0.92 were achieved for the BCC group. The specificity for the tumor-free control group was 0.98.</p><p><strong>Conclusion: </strong>The deep learning model developed in our study holds the potential to assist the diagnostic decision-making process and diminish the training time of novices by depicting tumor-positive regions in EVCM images.</p>","PeriodicalId":13950,"journal":{"name":"International Journal of Dermatology","volume":" ","pages":""},"PeriodicalIF":3.5000,"publicationDate":"2024-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Detection of basal cell carcinoma by machine learning-assisted ex vivo confocal laser scanning microscopy.\",\"authors\":\"Pinar Avci, Marie C Düsedau, Víctor Padrón-Laso, Zan Jonke, Ramona Fenderle, Florian Neumeier, Ikenna U Ikeliani\",\"doi\":\"10.1111/ijd.17519\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Ex vivo confocal laser scanning microscopy (EVCM) is an emerging imaging modality that enables near real-time histology of whole tissue samples. However, the adoption of EVCM into clinical routine is partly limited because the recognition of modality-specific diagnostic features requires specialized training. Therefore, we aimed to build a machine learning algorithm for the detection of basal cell carcinoma (BCC) in images acquired using EVCM and, in turn, facilitate the examiner's decision-making process.</p><p><strong>Methods: </strong>In this proof-of-concept study, histologically confirmed BCC fresh tissue samples were used to generate 50 EVCM images to train and assess a convolutional neural network architecture (MobileNet-V1) via tenfold cross-validation.</p><p><strong>Results: </strong>Overall sensitivity and specificity of the model for detecting BCC and tumor-free regions on EVCM images compared to expert evaluation were 0.88 and 0.85, respectively. We constructed receiver operator characteristic and precision-recall curves from the aggregated tenfold cross-validation to assess the model's performance; the area under the curve was 0.94 and 0.87, respectively. Subsequently, the performance of one of the selected machine learning models was assessed with 19 new EVCM images of tumor-containing (n = 10) and 9 tumor-free (n = 9) skin tissue. A sensitivity of 0.83 and a specificity of 0.92 were achieved for the BCC group. The specificity for the tumor-free control group was 0.98.</p><p><strong>Conclusion: </strong>The deep learning model developed in our study holds the potential to assist the diagnostic decision-making process and diminish the training time of novices by depicting tumor-positive regions in EVCM images.</p>\",\"PeriodicalId\":13950,\"journal\":{\"name\":\"International Journal of Dermatology\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":3.5000,\"publicationDate\":\"2024-12-03\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Dermatology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1111/ijd.17519\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"DERMATOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Dermatology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1111/ijd.17519","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"DERMATOLOGY","Score":null,"Total":0}
Detection of basal cell carcinoma by machine learning-assisted ex vivo confocal laser scanning microscopy.
Background: Ex vivo confocal laser scanning microscopy (EVCM) is an emerging imaging modality that enables near real-time histology of whole tissue samples. However, the adoption of EVCM into clinical routine is partly limited because the recognition of modality-specific diagnostic features requires specialized training. Therefore, we aimed to build a machine learning algorithm for the detection of basal cell carcinoma (BCC) in images acquired using EVCM and, in turn, facilitate the examiner's decision-making process.
Methods: In this proof-of-concept study, histologically confirmed BCC fresh tissue samples were used to generate 50 EVCM images to train and assess a convolutional neural network architecture (MobileNet-V1) via tenfold cross-validation.
Results: Overall sensitivity and specificity of the model for detecting BCC and tumor-free regions on EVCM images compared to expert evaluation were 0.88 and 0.85, respectively. We constructed receiver operator characteristic and precision-recall curves from the aggregated tenfold cross-validation to assess the model's performance; the area under the curve was 0.94 and 0.87, respectively. Subsequently, the performance of one of the selected machine learning models was assessed with 19 new EVCM images of tumor-containing (n = 10) and 9 tumor-free (n = 9) skin tissue. A sensitivity of 0.83 and a specificity of 0.92 were achieved for the BCC group. The specificity for the tumor-free control group was 0.98.
Conclusion: The deep learning model developed in our study holds the potential to assist the diagnostic decision-making process and diminish the training time of novices by depicting tumor-positive regions in EVCM images.
期刊介绍:
Published monthly, the International Journal of Dermatology is specifically designed to provide dermatologists around the world with a regular, up-to-date source of information on all aspects of the diagnosis and management of skin diseases. Accepted articles regularly cover clinical trials; education; morphology; pharmacology and therapeutics; case reports, and reviews. Additional features include tropical medical reports, news, correspondence, proceedings and transactions, and education.
The International Journal of Dermatology is guided by a distinguished, international editorial board and emphasizes a global approach to continuing medical education for physicians and other providers of health care with a specific interest in problems relating to the skin.