模型极性活性物质中紫菀缺陷的粗化动力学。

IF 2.9 3区 化学 Q3 CHEMISTRY, PHYSICAL
Soft Matter Pub Date : 2024-11-11 DOI:10.1039/D4SM00788C
Soumyadeep Mondal, Pankaj Popli and Sumantra Sarkar
{"title":"模型极性活性物质中紫菀缺陷的粗化动力学。","authors":"Soumyadeep Mondal, Pankaj Popli and Sumantra Sarkar","doi":"10.1039/D4SM00788C","DOIUrl":null,"url":null,"abstract":"<p >We numerically study the dynamics of topological defects in 2D polar active matter coupled to a conserved density field, which shows anomalous kinetics and defect distribution. The initial many-defect state relaxes by pair-annihilation of defects, which behave like Ostwald ripening on short timescales. However, defect coarsening is arrested at long timescales, and the relaxation kinetics becomes anomalously slow compared to the equilibrium state. Specifically, the number of defects in the active system approaches a steady state, following a power-law dependence in the rate of change of the inverse density. In contrast, in thermal equilibrium, the decay is exponential. Finally, we show that the anomalous coarsening of defects leads to unique patterns in the coupled density field, which is consistent with patterns observed in experiments on the actin cytoskeleton. These patterns can act as cell signaling platforms and may have important biological consequences.</p>","PeriodicalId":103,"journal":{"name":"Soft Matter","volume":" 1","pages":" 77-86"},"PeriodicalIF":2.9000,"publicationDate":"2024-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Coarsening dynamics of aster defects in model polar active matter†\",\"authors\":\"Soumyadeep Mondal, Pankaj Popli and Sumantra Sarkar\",\"doi\":\"10.1039/D4SM00788C\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >We numerically study the dynamics of topological defects in 2D polar active matter coupled to a conserved density field, which shows anomalous kinetics and defect distribution. The initial many-defect state relaxes by pair-annihilation of defects, which behave like Ostwald ripening on short timescales. However, defect coarsening is arrested at long timescales, and the relaxation kinetics becomes anomalously slow compared to the equilibrium state. Specifically, the number of defects in the active system approaches a steady state, following a power-law dependence in the rate of change of the inverse density. In contrast, in thermal equilibrium, the decay is exponential. Finally, we show that the anomalous coarsening of defects leads to unique patterns in the coupled density field, which is consistent with patterns observed in experiments on the actin cytoskeleton. These patterns can act as cell signaling platforms and may have important biological consequences.</p>\",\"PeriodicalId\":103,\"journal\":{\"name\":\"Soft Matter\",\"volume\":\" 1\",\"pages\":\" 77-86\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2024-11-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Soft Matter\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://pubs.rsc.org/en/content/articlelanding/2025/sm/d4sm00788c\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Soft Matter","FirstCategoryId":"92","ListUrlMain":"https://pubs.rsc.org/en/content/articlelanding/2025/sm/d4sm00788c","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0

摘要

我们对二维极性活性物质与守恒密度场耦合的拓扑缺陷动力学进行了数值研究,结果显示出异常动力学和缺陷分布。初始多缺陷态通过缺陷对湮灭而松弛,在短时间尺度上表现为奥斯特瓦尔德成熟。然而,缺陷粗化在长时间尺度上被阻止,松弛动力学与平衡状态相比变得异常缓慢。具体地说,有源系统中的缺陷数量接近稳定状态,遵循逆密度变化率的幂律依赖关系。相反,在热平衡中,衰减是指数的。最后,我们发现缺陷的异常粗化导致耦合密度场中独特的图案,这与在肌动蛋白细胞骨架上观察到的图案一致。这些模式可以作为细胞信号传导平台,并可能具有重要的生物学后果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Coarsening dynamics of aster defects in model polar active matter†

Coarsening dynamics of aster defects in model polar active matter†

We numerically study the dynamics of topological defects in 2D polar active matter coupled to a conserved density field, which shows anomalous kinetics and defect distribution. The initial many-defect state relaxes by pair-annihilation of defects, which behave like Ostwald ripening on short timescales. However, defect coarsening is arrested at long timescales, and the relaxation kinetics becomes anomalously slow compared to the equilibrium state. Specifically, the number of defects in the active system approaches a steady state, following a power-law dependence in the rate of change of the inverse density. In contrast, in thermal equilibrium, the decay is exponential. Finally, we show that the anomalous coarsening of defects leads to unique patterns in the coupled density field, which is consistent with patterns observed in experiments on the actin cytoskeleton. These patterns can act as cell signaling platforms and may have important biological consequences.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Soft Matter
Soft Matter 工程技术-材料科学:综合
CiteScore
6.00
自引率
5.90%
发文量
891
审稿时长
1.9 months
期刊介绍: Soft Matter is an international journal published by the Royal Society of Chemistry using Engineering-Materials Science: A Synthesis as its research focus. It publishes original research articles, review articles, and synthesis articles related to this field, reporting the latest discoveries in the relevant theoretical, practical, and applied disciplines in a timely manner, and aims to promote the rapid exchange of scientific information in this subject area. The journal is an open access journal. The journal is an open access journal and has not been placed on the alert list in the last three years.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信