精神分裂症生物标志物:血液转录组提示两种分子亚型。

IF 3.3 4区 医学 Q2 NEUROSCIENCES
Herut Dor, Libi Hertzberg
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引用次数: 0

摘要

精神分裂症是一种慢性疾病,给患者、他们的家庭和卫生保健系统带来了沉重的负担。虽然它有大量的遗传成分,但它的异质性-遗传和临床-限制了识别致病基因和机制的能力。在这项研究中,我们分析了从五个公共数据集中获得的398个样本(212名精神分裂症患者和186名对照组)的血液转录组。我们通过使用无监督机器学习算法将精神分裂症患者分为两种分子亚型来证明这种异质性。我们发现对聚类影响最大的基因在与核糖体和泛素-蛋白酶体系统相关的途径中富集,这些途径已知与精神分裂症相关。基于这些基因的表达水平,我们建立了一个逻辑回归模型,能够在不相关的数据集中预测精神分裂症样本,阳性预测值为64% (p值= 0.039)。在未来,将血液转录组学与临床特征相结合,可以定义不同的分子亚型,从而更好地了解精神分裂症的病理生理学,并有助于开发个性化药物和治疗方案。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Schizophrenia Biomarkers: Blood Transcriptome Suggests Two Molecular Subtypes.

Schizophrenia is a chronic illness that imposes a significant burden on patients, their families, and the health care system. While it has a substantial genetic component, its heterogeneous nature-both genetic and clinical-limits the ability to identify causal genes and mechanisms. In this study, we analyzed the blood transcriptomes of 398 samples (212 patients with schizophrenia and 186 controls) obtained from five public datasets. We demonstrated this heterogeneity by clustering patients with schizophrenia into two molecular subtypes using an unsupervised machine-learning algorithm. We found that the genes most influential in clustering were enriched in pathways related to the ribosome and ubiquitin-proteasomes system, which are known to be associated with schizophrenia. Based on the expression levels of these genes, we developed a logistic regression model capable of predicting schizophrenia samples in unrelated datasets with a positive predictive value of 64% (p value = 0.039). In the future, integrating blood transcriptomics with clinical characteristics may enable the definition of distinct molecular subtypes, leading to a better understanding of schizophrenia pathophysiology and aiding in the development of personalized drugs and treatment options.

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来源期刊
NeuroMolecular Medicine
NeuroMolecular Medicine 医学-神经科学
CiteScore
7.10
自引率
0.00%
发文量
33
审稿时长
>12 weeks
期刊介绍: NeuroMolecular Medicine publishes cutting-edge original research articles and critical reviews on the molecular and biochemical basis of neurological disorders. Studies range from genetic analyses of human populations to animal and cell culture models of neurological disorders. Emerging findings concerning the identification of genetic aberrancies and their pathogenic mechanisms at the molecular and cellular levels will be included. Also covered are experimental analyses of molecular cascades involved in the development and adult plasticity of the nervous system, in neurological dysfunction, and in neuronal degeneration and repair. NeuroMolecular Medicine encompasses basic research in the fields of molecular genetics, signal transduction, plasticity, and cell death. The information published in NEMM will provide a window into the future of molecular medicine for the nervous system.
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