Cerasicoccus fimbriatus sp.

IF 1.8 3区 生物学 Q4 MICROBIOLOGY
Xuanyun Qiu, Beihan Chen, Dan Lin, Guohua Liu, Zhiyi Su, Mingzhe Zhang, Kai Tang
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引用次数: 0

摘要

从西南印度洋中脊分离出一种革兰氏染色阴性细菌,命名为 TK19100T 菌株。TK19100T 菌株的细胞严格需氧,不运动,呈短杆状,细胞表面有流苏状结构。生长温度为 15-40℃,pH 值为 6.0-9.0,NaCl 含量为 1-10%(w/v)。菌株 TK19100T 与 Cerasicoccus frondis NBRC 105381T 的 16S rRNA 基因序列相似度最高,为 97.74%,其次是 Cerasicoccus arenae KCTC 12870T 为 97.69%,Cerasicoccus maritimus NBRC 105382T 为 97.40%。基于 16S rRNA 基因和 92 个核心基因的系统发生树将菌株 TK19100T 置于 Cerasicoccus 属中的一个新系。菌株 TK19100T 的基因组大小为 5.07 Mb,DNA G + C 含量为 56.1%。菌株 TK19100T 与近缘种 Cerasicoccus frondis 的平均核苷酸同一性值和数字 DNA-DNA 杂交值分别为 78.39% 和 23.70%。菌株 TK19100T 编码以前未报道过的 GH16 和碳水化合物结合模块 96 的组合。菌株 TK19100T 的主要脂肪酸为 C14:0 和 C18:1 ω9c。门醌-7是唯一的呼吸醌。表型和基因型特征分析表明,菌株 TK19100T 代表了隶属于 Cerasicoccus 属的一个新物种,因此拟命名为 Cerasicoccus fimbriatus sp.模式菌株为 TK19100T(= CGMCC 1.18957T = NBRC 116189T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Cerasicoccus fimbriatus sp. nov., isolated from the mid-ridge of the Southwest Indian Ocean

Cerasicoccus fimbriatus sp. nov., isolated from the mid-ridge of the Southwest Indian Ocean

A Gram-stain-negative bacterium, designated as strain TK19100T, was isolated from the mid-ridge of the Southwest Indian Ocean. Cells of strain TK19100T were strictly aerobic, non-motile and short-rod shaped with fimbriae-like structures around the cell surface. Growth occurred at 15–40 °C, at pH 6.0–9.0 and with 1–10% (w/v) NaCl. Strain TK19100T shared the highest 16S rRNA gene sequence similarity with Cerasicoccus frondis NBRC 105381T of 97.74%, followed by Cerasicoccus arenae KCTC 12870T of 97.69% and Cerasicoccus maritimus NBRC 105382T of 97.40%. The phylogenetic tree based on both 16S rRNA genes and 92 core genes placed strain TK19100T in a new linage within the genus Cerasicoccus. The genome size of strain TK19100T was 5.07 Mb with the DNA G + C content 56.1%. The average nucleotide identity value and the digital DNA-DNA hybridization value of strain TK19100T compared with the closest related species, Cerasicoccus frondis, were 78.39% and 23.70%, respectively. Strain TK19100T encoded a previously unreported combination of GH16 and Carbohydrate Binding Module 96. The major fatty acids of strain TK19100T were C14:0 and C18:1 ω9c. Menaquinone-7 was the sole respiratory quinone. The phenotypic and genotypic characterization analysis indicate that strain TK19100T represents a novel species affiliated to the genus Cerasicoccus, for which the name Cerasicoccus fimbriatus sp. nov. is proposed. The type strain is TK19100T (= CGMCC 1.18957T = NBRC 116189T).

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来源期刊
CiteScore
5.60
自引率
11.50%
发文量
104
审稿时长
3 months
期刊介绍: Antonie van Leeuwenhoek publishes papers on fundamental and applied aspects of microbiology. Topics of particular interest include: taxonomy, structure & development; biochemistry & molecular biology; physiology & metabolic studies; genetics; ecological studies; especially molecular ecology; marine microbiology; medical microbiology; molecular biological aspects of microbial pathogenesis and bioinformatics.
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