意大利西西里岛外的第勒尼安海幼鱼 Oblada melanura (Linnaeus, 1758) 中 Philometra obladae(线虫纲:Philometridae)的分子特征。

IF 3.3 3区 医学 Q2 MICROBIOLOGY
Giovanni De Benedetto, Kristian Riolo, Emanuela Sturiale, Alessia Giannetto, Gabriella Gaglio
{"title":"意大利西西里岛外的第勒尼安海幼鱼 Oblada melanura (Linnaeus, 1758) 中 Philometra obladae(线虫纲:Philometridae)的分子特征。","authors":"Giovanni De Benedetto, Kristian Riolo, Emanuela Sturiale, Alessia Giannetto, Gabriella Gaglio","doi":"10.3390/pathogens13110971","DOIUrl":null,"url":null,"abstract":"<p><p><i>Philometra obladae</i> is a nematode belonging to the family Philometridae. It was morphologically described for the first time in 2008 in <i>Oblada melanura</i>. To date, few data on the molecular characterization of Philometridae have been reported. The aim of the present study was to molecularly characterize <i>Philometra obladae</i> in <i>O. melanura</i> inhabiting the Tyrrhenian coasts off Sicily, Italy. In July 2023, five nematodes were found and morphologically identified as <i>Ph. obladae</i> from the celomic cavity of four <i>O. melanura</i> specimens. Genomic DNA from four nematodes was extracted and two molecular markers, the ribosomal <i>18S rRNA</i> and the mitochondrial <i>cox1</i>, were amplified using polymerase chain reaction. The sequences obtained were aligned using the MUSCLE algorithm and were used for phylogenetic analyses. Partial sequences of both markers were submitted to GenBank. Phylogenetic trees for both markers resulted in very similar topologies with high posterior probabilities and bootstrap values. Comparisons of our results indicated that <i>Ph. obladae</i> is related to the sequences of other Philometridae isolated from different hosts and different geographic areas. Phylogenetic analysis was carried out to compare the sequences of <i>Ph. obladae</i> with other marine Philometridae, which allowed for the molecular characterization of <i>Ph. obladae</i> as an independent species for the first time.</p>","PeriodicalId":19758,"journal":{"name":"Pathogens","volume":"13 11","pages":""},"PeriodicalIF":3.3000,"publicationDate":"2024-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11597370/pdf/","citationCount":"0","resultStr":"{\"title\":\"Molecular Characterization of <i>Philometra obladae</i> (Nematoda: Philometridae) in Juvenile <i>Oblada melanura</i> (Linnaeus, 1758) from the Tyrrhenian Sea off Sicily, Italy.\",\"authors\":\"Giovanni De Benedetto, Kristian Riolo, Emanuela Sturiale, Alessia Giannetto, Gabriella Gaglio\",\"doi\":\"10.3390/pathogens13110971\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Philometra obladae</i> is a nematode belonging to the family Philometridae. It was morphologically described for the first time in 2008 in <i>Oblada melanura</i>. To date, few data on the molecular characterization of Philometridae have been reported. The aim of the present study was to molecularly characterize <i>Philometra obladae</i> in <i>O. melanura</i> inhabiting the Tyrrhenian coasts off Sicily, Italy. In July 2023, five nematodes were found and morphologically identified as <i>Ph. obladae</i> from the celomic cavity of four <i>O. melanura</i> specimens. Genomic DNA from four nematodes was extracted and two molecular markers, the ribosomal <i>18S rRNA</i> and the mitochondrial <i>cox1</i>, were amplified using polymerase chain reaction. The sequences obtained were aligned using the MUSCLE algorithm and were used for phylogenetic analyses. Partial sequences of both markers were submitted to GenBank. Phylogenetic trees for both markers resulted in very similar topologies with high posterior probabilities and bootstrap values. Comparisons of our results indicated that <i>Ph. obladae</i> is related to the sequences of other Philometridae isolated from different hosts and different geographic areas. Phylogenetic analysis was carried out to compare the sequences of <i>Ph. obladae</i> with other marine Philometridae, which allowed for the molecular characterization of <i>Ph. obladae</i> as an independent species for the first time.</p>\",\"PeriodicalId\":19758,\"journal\":{\"name\":\"Pathogens\",\"volume\":\"13 11\",\"pages\":\"\"},\"PeriodicalIF\":3.3000,\"publicationDate\":\"2024-11-06\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11597370/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Pathogens\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.3390/pathogens13110971\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Pathogens","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.3390/pathogens13110971","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

Philometra obladae 是一种线虫,属于 Philometridae 科。2008 年,首次在 Oblada melanura 中对其进行了形态学描述。迄今为止,有关 Philometridae 分子特征的数据报道很少。本研究旨在对栖息于意大利西西里岛附近第勒尼安海沿岸的 O. melanura 中的 Philometra obladae 进行分子鉴定。2023 年 7 月,研究人员从四只 O. melanura 标本的腹腔中发现了五条线虫,经形态学鉴定为 Philometra obladae。提取了四条线虫的基因组 DNA,并利用聚合酶链式反应扩增了两个分子标记:核糖体 18S rRNA 和线粒体 cox1。利用 MUSCLE 算法对获得的序列进行比对,并用于系统发育分析。两个标记的部分序列已提交给 GenBank。两个标记的系统发生树的拓扑结构非常相似,后验概率和引导值都很高。比较结果表明,Ph. obladae 与从不同寄主和不同地理区域分离出来的其他 Philometridae 的序列有关。通过系统进化分析,我们比较了Ph. obladae与其他海洋Philometridae的序列,首次将Ph. obladae作为一个独立物种进行分子鉴定。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Molecular Characterization of Philometra obladae (Nematoda: Philometridae) in Juvenile Oblada melanura (Linnaeus, 1758) from the Tyrrhenian Sea off Sicily, Italy.

Philometra obladae is a nematode belonging to the family Philometridae. It was morphologically described for the first time in 2008 in Oblada melanura. To date, few data on the molecular characterization of Philometridae have been reported. The aim of the present study was to molecularly characterize Philometra obladae in O. melanura inhabiting the Tyrrhenian coasts off Sicily, Italy. In July 2023, five nematodes were found and morphologically identified as Ph. obladae from the celomic cavity of four O. melanura specimens. Genomic DNA from four nematodes was extracted and two molecular markers, the ribosomal 18S rRNA and the mitochondrial cox1, were amplified using polymerase chain reaction. The sequences obtained were aligned using the MUSCLE algorithm and were used for phylogenetic analyses. Partial sequences of both markers were submitted to GenBank. Phylogenetic trees for both markers resulted in very similar topologies with high posterior probabilities and bootstrap values. Comparisons of our results indicated that Ph. obladae is related to the sequences of other Philometridae isolated from different hosts and different geographic areas. Phylogenetic analysis was carried out to compare the sequences of Ph. obladae with other marine Philometridae, which allowed for the molecular characterization of Ph. obladae as an independent species for the first time.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Pathogens
Pathogens Medicine-Immunology and Allergy
CiteScore
6.40
自引率
8.10%
发文量
1285
审稿时长
17.75 days
期刊介绍: Pathogens (ISSN 2076-0817) publishes reviews, regular research papers and short notes on all aspects of pathogens and pathogen-host interactions. There is no restriction on the length of the papers. Our aim is to encourage scientists to publish their experimental and theoretical research in as much detail as possible. Full experimental and/or methodical details must be provided for research articles.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信