通过 DFT 计算、分子对接和实验验证的新型、快速和环保的羧甲基纤维素-掺氮碳点生物传感器

IF 5 3区 化学 Q1 POLYMER SCIENCE
Gels Pub Date : 2024-10-24 DOI:10.3390/gels10110686
Hebat-Allah S Tohamy
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引用次数: 0

摘要

利用一种新型微波方法在几分钟内从甘蔗渣(SB)中制备出了羧甲基纤维素(CMC)。此外,还利用同样的微波技术从甘蔗渣中合成了掺氮碳点(N-CDs)。这些材料与 CaCl2 交联,制备出抗菌/抗真菌水凝胶传感器。在这方面,CMC@Ca 和 CMC@Ca-N-CD 都对大肠杆菌(革兰氏阴性)具有抗菌活性,而只有 CMC@Ca-N-CD 对金黄色葡萄球菌(革兰氏阳性)具有抗菌活性。此外,两种材料都对白色念珠菌具有抗真菌活性。分子对接研究表明,CMC@Ca-N-CD 与大肠杆菌、金黄色葡萄球菌和白色念珠菌的蛋白质结合良好,结合键长度分别为 2.59、2.80 和 1.97 A°。观察到的抑制区直径证实了这些结合亲和力。此外,荧光显微镜还显示了革兰氏阳性菌和革兰氏阴性菌以及致病性酵母(真菌)之间不同的成像模式。CMC@Ca-N-CDs 在接触大肠杆菌和白色念珠菌时发出蓝光(即 CMC@Ca-N-CDs/ 大肠杆菌和白色念珠菌),而在接触金黄色葡萄球菌时则发出亮红光(即 CMC@Ca-N-CDs/ 金黄色葡萄球菌)。荧光发射颜色的差异是由于这些微生物的细胞壁不同造成的。此外,我们还进行了 DFT 计算,以证实 CMC、Ca2+ 和 N-CD 之间强大的化学相互作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Novel, Speedy, and Eco-Friendly Carboxymethyl Cellulose-Nitrogen Doped Carbon Dots Biosensors with DFT Calculations, Molecular Docking, and Experimental Validation.

Carboxymethyl cellulose (CMC) was prepared from sugarcane bagasse (SB) in minutes using a novel microwave method. Additionally, nitrogen-doped carbon dots (N-CDs) were synthesized from SB using the same microwave technique. These materials were crosslinked with CaCl2 to prepare antibacterial/antifungal hydrogel sensors. In this regard, both CMC@Ca and CMC@Ca-N-CDs exhibited antibacterial activity against Escherichia coli (Gram negative), while only CMC@Ca-N-CDs demonstrated antibacterial activity against Staphylococcus aureus (Gram positive). Moreover, both materials showed antifungal activity against Candida albicans. The molecular docking study demonstrated that CMC@Ca-N-CDs showed good binding with proteins with short bond length 2.59, 2.80, and 1.97 A° for Escherichia coli, Staphylococcus aureus, and Candida albicans, respectively. These binding affinities were corroborated by the observed inhibition zone diameters. Furthermore, fluorescence microscope revealed distinct imaging patterns between Gram-positive and Gram-negative bacteria, as well as pathogenic yeast (fungi). CMC@Ca-N-CDs emitted blue light when exposed to Escherichia coli and Candida albicans (i.e., CMC@Ca-N-CDs/Escherichia coli and Candida albicans), whereas it emitted bright-red light when exposed to Staphylococcus aureus (i.e., CMC@Ca-N-CDs/Staphylococcus aureus). This disparity in the fluorescence-emitted colors is due to the difference in the cell wall of these microorganisms. Additionally, DFT calculations were conducted to substantiate the robust chemical interactions between CMC, Ca2+, and N-CDs.

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来源期刊
Gels
Gels POLYMER SCIENCE-
CiteScore
4.70
自引率
19.60%
发文量
707
审稿时长
11 weeks
期刊介绍: The journal Gels (ISSN 2310-2861) is an international, open access journal on physical (supramolecular) and chemical gel-based materials. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on the maximum length of the papers, and full experimental details must be provided so that the results can be reproduced. Short communications, full research papers and review papers are accepted formats for the preparation of the manuscripts. Gels aims to serve as a reference journal with a focus on gel materials for researchers working in both academia and industry. Therefore, papers demonstrating practical applications of these materials are particularly welcome. Occasionally, invited contributions (i.e., original research and review articles) on emerging issues and high-tech applications of gels are published as special issues.
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