木兰科植物 Michelia xinningia 的完整叶绿体基因组序列。

IF 0.5 4区生物学 Q4 GENETICS & HEREDITY

Mitochondrial DNA. Part B, Resources Pub Date : 2024-11-22 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2432378

Nawaz Haider Bashir, Muhammad Naeem, Zijie Wang, Yong Gao

{"title":"木兰科植物 Michelia xinningia 的完整叶绿体基因组序列。","authors":"Nawaz Haider Bashir, Muhammad Naeem, Zijie Wang, Yong Gao","doi":"10.1080/23802359.2024.2432378","DOIUrl":null,"url":null,"abstract":"Michelia xinningia is an evergreen garden plant with attractive and fragrant flowers. Michelia exhibits both interspecific and intraspecific phenotypic variability. However, the genetic diversity of M. xinningia has not been thoroughly investigated. This study analyzed the first chloroplast genome of M. xinningia, which was 160,082 bp, including a large single-copy (LSC) region of 88,112 bp, a small single-copy (SSC) region of 18,798 bp, and a pair of inverted repeat (IRs) regions of 26,586 bp. It contained 133 genes, including 87 protein-coding genes, 38 transfer RNA genes, and eight ribosomal RNA genes. Phylogenetic analysis showed that M. xinningia formed a close relationship with M. foveolata. This study will provide an opportunity to investigate genetic variation and could be useful for both species identification and conservation.","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"9 11","pages":"1601-1605"},"PeriodicalIF":0.5000,"publicationDate":"2024-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11587716/pdf/","citationCount":"0","resultStr":"{\"title\":\"The complete chloroplast genome sequence of Michelia xinningia (Magnoliaceae).\",\"authors\":\"Nawaz Haider Bashir, Muhammad Naeem, Zijie Wang, Yong Gao\",\"doi\":\"10.1080/23802359.2024.2432378\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Michelia xinningia is an evergreen garden plant with attractive and fragrant flowers. Michelia exhibits both interspecific and intraspecific phenotypic variability. However, the genetic diversity of M. xinningia has not been thoroughly investigated. This study analyzed the first chloroplast genome of M. xinningia, which was 160,082 bp, including a large single-copy (LSC) region of 88,112 bp, a small single-copy (SSC) region of 18,798 bp, and a pair of inverted repeat (IRs) regions of 26,586 bp. It contained 133 genes, including 87 protein-coding genes, 38 transfer RNA genes, and eight ribosomal RNA genes. Phylogenetic analysis showed that M. xinningia formed a close relationship with M. foveolata. This study will provide an opportunity to investigate genetic variation and could be useful for both species identification and conservation.\",\"PeriodicalId\":18647,\"journal\":{\"name\":\"Mitochondrial DNA. Part B, Resources\",\"volume\":\"9 11\",\"pages\":\"1601-1605\"},\"PeriodicalIF\":0.5000,\"publicationDate\":\"2024-11-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11587716/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial DNA. Part B, Resources\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2432378\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2432378","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}

引用次数: 0

摘要

Michelia xinningia 是一种常绿园林植物，花香诱人。新茑萝具有种间和种内表型变异性。然而，人们还没有对新茑萝（M. xinningia）的遗传多样性进行深入研究。本研究分析了新宁花（M. xinningia）的第一个叶绿体基因组，其长度为 160,082 bp，包括一个 88,112 bp 的大单拷贝（LSC）区、一个 18,798 bp 的小单拷贝（SSC）区和一对 26,586 bp 的倒位重复（IRs）区。它包含 133 个基因，包括 87 个蛋白质编码基因、38 个转移 RNA 基因和 8 个核糖体 RNA 基因。系统进化分析表明，M. xinningia 与 M. foveolata 关系密切。这项研究将提供一个研究遗传变异的机会，对物种鉴定和保护很有帮助。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

查看原文本刊更多论文

The complete chloroplast genome sequence of Michelia xinningia (Magnoliaceae).

Michelia xinningia is an evergreen garden plant with attractive and fragrant flowers. Michelia exhibits both interspecific and intraspecific phenotypic variability. However, the genetic diversity of M. xinningia has not been thoroughly investigated. This study analyzed the first chloroplast genome of M. xinningia, which was 160,082 bp, including a large single-copy (LSC) region of 88,112 bp, a small single-copy (SSC) region of 18,798 bp, and a pair of inverted repeat (IRs) regions of 26,586 bp. It contained 133 genes, including 87 protein-coding genes, 38 transfer RNA genes, and eight ribosomal RNA genes. Phylogenetic analysis showed that M. xinningia formed a close relationship with M. foveolata. This study will provide an opportunity to investigate genetic variation and could be useful for both species identification and conservation.

求助全文

通过发布文献求助，成功后即可免费获取论文全文。去求助

来源期刊

Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology

CiteScore

1.30

自引率

20.00%

发文量

670

期刊介绍： This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.