Zaroon Sajid, Tashfeen Akhtar, Dr. Khalil Ahmad, Dr. Muhammad Haroon
{"title":"新设计的 2-(2-(芳基)-4-氧代-4,5-二氢噻唑-5-基)乙酰肼类潜在抗结核药物的分子对接模拟和 ADMET/药代动力学筛选","authors":"Zaroon Sajid, Tashfeen Akhtar, Dr. Khalil Ahmad, Dr. Muhammad Haroon","doi":"10.1002/slct.202403715","DOIUrl":null,"url":null,"abstract":"<p>The in silico approach is a smart strategy to identify the potential of a compound to be biologically active against a target disease and to design a more efficient drug candidate. In this work, in silico molecular docking simulation of twenty two (22) newly designed 2-(2-(aryl)-4-oxo-4,5-dihydrothiazol-5-yl)acetohydrazides against DNA gyrase subunit B (<i>Gyr B</i>) is performed using AutoDock Vina. The majority of the designed molecules were found to have a binding affinity higher than the moxifloxacin standard drug. The top five scaffolds with the highest binding affinity (ranging from −6.5 to −7.0 kcal/mol) were chosen as the lead depending on the better orientation of the pose and H-bond interactions. The ADME and toxicity profiles of the selected scaffolds were assessed through SwissADME and Pro-Tox II, providing valuable insights into their potential safety and efficacy. The chosen compounds had excellent pharmacokinetic characteristics, including low toxicity, good oral bio-availability, and acceptable GI absorption. The results suggest that the title compounds possess significant potential as lead molecules for the development of novel therapeutics against multidrug-resistant tuberculosis, providing valuable insights for medicinal chemists and pharmaceutical professionals to design and synthesize novel drug candidates with improved efficacy.</p>","PeriodicalId":146,"journal":{"name":"ChemistrySelect","volume":"9 44","pages":""},"PeriodicalIF":1.9000,"publicationDate":"2024-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Molecular Docking Simulation and ADMET/Pharmacokinetic Screening of Newly Designed 2-(2-(aryl)-4-oxo-4,5-dihydrothiazol-5-yl)acetohydrazides as Potential Antitubercular Agents\",\"authors\":\"Zaroon Sajid, Tashfeen Akhtar, Dr. Khalil Ahmad, Dr. Muhammad Haroon\",\"doi\":\"10.1002/slct.202403715\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>The in silico approach is a smart strategy to identify the potential of a compound to be biologically active against a target disease and to design a more efficient drug candidate. In this work, in silico molecular docking simulation of twenty two (22) newly designed 2-(2-(aryl)-4-oxo-4,5-dihydrothiazol-5-yl)acetohydrazides against DNA gyrase subunit B (<i>Gyr B</i>) is performed using AutoDock Vina. The majority of the designed molecules were found to have a binding affinity higher than the moxifloxacin standard drug. The top five scaffolds with the highest binding affinity (ranging from −6.5 to −7.0 kcal/mol) were chosen as the lead depending on the better orientation of the pose and H-bond interactions. The ADME and toxicity profiles of the selected scaffolds were assessed through SwissADME and Pro-Tox II, providing valuable insights into their potential safety and efficacy. The chosen compounds had excellent pharmacokinetic characteristics, including low toxicity, good oral bio-availability, and acceptable GI absorption. The results suggest that the title compounds possess significant potential as lead molecules for the development of novel therapeutics against multidrug-resistant tuberculosis, providing valuable insights for medicinal chemists and pharmaceutical professionals to design and synthesize novel drug candidates with improved efficacy.</p>\",\"PeriodicalId\":146,\"journal\":{\"name\":\"ChemistrySelect\",\"volume\":\"9 44\",\"pages\":\"\"},\"PeriodicalIF\":1.9000,\"publicationDate\":\"2024-11-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ChemistrySelect\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/slct.202403715\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ChemistrySelect","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/slct.202403715","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
摘要
硅学方法是一种聪明的策略,可用于确定化合物对目标疾病具有生物活性的潜力,并设计出更有效的候选药物。本研究利用 AutoDock Vina 对新设计的 22 个 2-(2-(芳基)-4-氧代-4,5-二氢噻唑-5-基)乙酰基吡嗪类化合物与 DNA 回旋酶亚基 B(Gyr B)进行了分子对接模拟。结果发现,大多数设计分子的结合亲和力高于莫西沙星标准药物。根据姿势和 H 键相互作用的较好取向,选择了结合亲和力最高(从 -6.5 到 -7.0 kcal/mol)的前五个支架作为先导。通过 SwissADME 和 Pro-Tox II 评估了所选支架的 ADME 和毒性特征,为了解其潜在的安全性和有效性提供了宝贵的信息。所选化合物具有出色的药代动力学特征,包括低毒性、良好的口服生物利用度和可接受的消化道吸收。研究结果表明,这些标题化合物具有作为先导分子开发抗耐多药结核病新型疗法的巨大潜力,为药物化学家和制药专家设计和合成具有更好疗效的新型候选药物提供了宝贵的见解。
Molecular Docking Simulation and ADMET/Pharmacokinetic Screening of Newly Designed 2-(2-(aryl)-4-oxo-4,5-dihydrothiazol-5-yl)acetohydrazides as Potential Antitubercular Agents
The in silico approach is a smart strategy to identify the potential of a compound to be biologically active against a target disease and to design a more efficient drug candidate. In this work, in silico molecular docking simulation of twenty two (22) newly designed 2-(2-(aryl)-4-oxo-4,5-dihydrothiazol-5-yl)acetohydrazides against DNA gyrase subunit B (Gyr B) is performed using AutoDock Vina. The majority of the designed molecules were found to have a binding affinity higher than the moxifloxacin standard drug. The top five scaffolds with the highest binding affinity (ranging from −6.5 to −7.0 kcal/mol) were chosen as the lead depending on the better orientation of the pose and H-bond interactions. The ADME and toxicity profiles of the selected scaffolds were assessed through SwissADME and Pro-Tox II, providing valuable insights into their potential safety and efficacy. The chosen compounds had excellent pharmacokinetic characteristics, including low toxicity, good oral bio-availability, and acceptable GI absorption. The results suggest that the title compounds possess significant potential as lead molecules for the development of novel therapeutics against multidrug-resistant tuberculosis, providing valuable insights for medicinal chemists and pharmaceutical professionals to design and synthesize novel drug candidates with improved efficacy.
期刊介绍:
ChemistrySelect is the latest journal from ChemPubSoc Europe and Wiley-VCH. It offers researchers a quality society-owned journal in which to publish their work in all areas of chemistry. Manuscripts are evaluated by active researchers to ensure they add meaningfully to the scientific literature, and those accepted are processed quickly to ensure rapid online publication.